RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 TAS2R4Q9NYW5 299 aa11.31□□□□□ -0.6
RPAIN-213ENST00000573577 LRCH1Q9Y2L9 728 aa11.31□□□□□ -0.6
RPAIN-213ENST00000573577 KIAA1324LA8MWY0 1029 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-213ENST00000573577 F5H0A9 414 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-213ENST00000573577 SYNGR1O43759 233 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 NOS1APO75052 506 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-213ENST00000573577 TNFAIP8O95379 198 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 PGA5P0DJD9 388 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 CPEP16870 476 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 POU3F4P49335 361 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 NPY4RP50391 375 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 GMFBP60983 142 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 ZNF529Q6P280 563 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 ZNF773Q6PK81 442 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 SLC36A1Q7Z2H8 476 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 FAM90A1Q86YD7 464 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 CALHM1Q8IU99 346 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 Q8IYB0 196 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 SPARTQ8N0X7 666 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 POC1AQ8NBT0 407 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 C19orf18Q8NEA5 215 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 NEIL1Q96FI4 390 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-213ENST00000573577 OR14A2Q96R54 314 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 TMED9Q9BVK6 235 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 DNTTIP1Q9H147 329 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 TMEM138Q9NPI0 162 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 NLKQ9UBE8 527 aa11.3□□□□□ -0.6
RPAIN-213ENST00000573577 IGKV1-27A0A075B6S5 117 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 IGHV3OR15-7A0A075B7D8 119 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 TRBV5-7A0A0A0MS05 114 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 A0A0G2JMP0 313 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 A0A0X1KG70 313 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 NKX6-3A6NJ46 265 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.29□□□□□ -0.6
RPAIN-213ENST00000573577 ADAM20O43506 726 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 NXPH2O95156 264 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 PLATP00750 562 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 GYPAP02724 150 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 ALDOBP05062 364 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 WNT2P09544 360 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 FSTP19883 344 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 BDKRB2P30411 391 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 PITPNBP48739 271 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 GNB2P62879 340 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 LCN2P80188 198 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 DOC2BQ14184 412 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 KISS1Q15726 138 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 ACSM3Q53FZ2 586 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 FAHD2BQ6P2I3 314 aaPredicted RBP11.29□□□□□ -0.6
RPAIN-213ENST00000573577 FIP1L1Q6UN15 594 aaKnown RBP11.29□□□□□ -0.6
RPAIN-213ENST00000573577 SLC25A26Q70HW3 274 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 OR4M2Q8NGB6 313 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 FAHD2AQ96GK7 314 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 CEP19Q96LK0 163 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 DERL3Q96Q80 235 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 GPER1Q99527 375 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 NRIP2Q9BQI9 281 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 SSBP3Q9BWW4 388 aaPredicted RBP11.29□□□□□ -0.6
RPAIN-213ENST00000573577 WDR13Q9H1Z4 485 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 KAAG1Q9UBP8 84 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 CLN8Q9UBY8 286 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 FOXJ3Q9UPW0 622 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 CUBNO60494 3623 aa11.29□□□□□ -0.6
RPAIN-213ENST00000573577 OR2AT4A6NND4 320 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 A8MXK9 166 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 TRAPPC2LH3BP13 241 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 TMPRSS2O15393 492 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 GPX5O75715 221 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 SRP14P37108 136 aaKnown RBP11.28□□□□□ -0.6
RPAIN-213ENST00000573577 TGFBR2P37173 567 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 SEC61A1P61619 476 aaKnown RBP11.28□□□□□ -0.6
RPAIN-213ENST00000573577 HOXA4Q00056 320 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-213ENST00000573577 PDZK1IP1Q13113 114 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 ARMCX4Q5H9R4 360 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 ATPAF1Q5TC12 328 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-213ENST00000573577 UBE2UQ5VVX9 321 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 STUMQ69YW2 141 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 ACP7Q6ZNF0 438 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 SATL1Q86VE3 508 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 PHC2Q8IXK0 858 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 SAXO1Q8IYX7 474 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 PNLDC1Q8NA58 520 aaKnown RBP11.28□□□□□ -0.6
RPAIN-213ENST00000573577 ZSCAN4Q8NAM6 433 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-213ENST00000573577 OR51A2Q8NGJ7 313 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 PHYHIPQ92561 330 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 SPACA5Q96QH8 159 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 RHOFQ9HBH0 211 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 VCX3AQ9NNX9 186 aa11.28□□□□□ -0.6
RPAIN-213ENST00000573577 PPIAL4CA0A0B4J2A2 164 aa11.27□□□□□ -0.61
RPAIN-213ENST00000573577 A0A1W2PPK0 400 aa11.27□□□□□ -0.61
RPAIN-213ENST00000573577 MEGF11A6BM72 1044 aa11.27□□□□□ -0.61
RPAIN-213ENST00000573577 J3QLI3 93 aa11.27□□□□□ -0.61
RPAIN-213ENST00000573577 TNFRSF13BO14836 293 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-213ENST00000573577 IGFBP3P17936 291 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-213ENST00000573577 GATA3P23771 443 aa11.27□□□□□ -0.61
RPAIN-213ENST00000573577 ZFP36P26651 326 aaKnown RBP11.27□□□□□ -0.61
RPAIN-213ENST00000573577 PSMB9P28065 219 aa11.27□□□□□ -0.61
RPAIN-213ENST00000573577 GABRA5P31644 462 aa11.27□□□□□ -0.61
RPAIN-213ENST00000573577 ERVK11-1P61568 191 aa11.27□□□□□ -0.61
RPAIN-213ENST00000573577 C11orf91Q3C1V1 193 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms