RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 AIFM1O95831 613 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 MOSP00540 346 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 IFNA10P01566 189 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 BPGMP07738 259 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 SMIM6P0DI80 62 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 RPL29P47914 159 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 EMX1Q04741 257 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 IHHQ14623 411 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 CEACAM16Q2WEN9 425 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 TMEM78Q5T7P6 136 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 C11orf71Q6IPW1 123 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 DCUN1D2Q6PH85 259 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 TBPL2Q6SJ96 375 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 UGT2A3Q6UWM9 527 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 TCF24Q7RTU0 167 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 C6orf120Q7Z4R8 191 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 PPP1R27Q86WC6 154 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 LRRC28Q86X40 367 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 C4orf32Q8N8J7 132 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 UBAC2Q8NBM4 344 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 CHST4Q8NCG5 386 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNRF1Q8ND25 227 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 OR4K15Q8NH41 348 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 MPLKIPQ8TAP9 179 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 SDR42E1Q8WUS8 393 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 TMEM203Q969S6 136 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 SARAFQ96BY9 339 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 DIRAS2Q96HU8 199 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 RDH12Q96NR8 316 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 OR2M4Q96R27 311 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 OR52E6Q96RD3 313 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 GPER1Q99527 375 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 MARVELD1Q9BSK0 173 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 EMC6Q9BV81 110 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 RIOK2Q9BVS4 552 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 TM2D1Q9BX74 207 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 MROQ9BYG7 248 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 SELENOIQ9C0D9 397 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 SPRR3Q9UBC9 169 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 OR12D3Q9UGF7 316 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 SHPKQ9UHJ6 478 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 JPT1Q9UK76 154 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 VSIG4Q9Y279 399 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 PPIP5K1Q6PFW1 1433 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 SETD5Q9C0A6 1442 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 ASTN1O14525 1302 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 TEX50A0A1B0GTY4 177 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 A0A1B0GVT2 93 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 ARL5CA6NH57 179 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 FAM25AB3EWG3 89 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 FAM25CB3EWG5 89 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 FAM25GB3EWG6 89 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 D6RAR5 112 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 TPST1O60507 370 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 RDH16O75452 317 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 REM1O75628 298 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 IFNGP01579 166 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 ALPLP05186 524 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 MMP7P09237 267 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 GKN3PP0CG01 181 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 ESDP10768 282 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 PSG1P11464 419 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 GPX2P18283 190 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 CD38P28907 300 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 MYCNOSP40205 109 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 RND2P52198 227 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 HSPE1P61604 102 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 LMO4P61968 165 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 PRDX1Q06830 199 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 FOXI1Q12951 378 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 QPRTQ15274 297 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 TTC32Q5I0X7 151 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 MUC21Q5SSG8 566 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 CNIH2Q6PI25 160 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF571Q7Z3V5 609 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 CALHM3Q86XJ0 350 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 SLC35G3Q8N808 338 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 BEST4Q8NFU0 473 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 OR2K2Q8NGT1 345 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 FAM168AQ92567 244 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 DCPSQ96C86 337 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 SEH1LQ96EE3 360 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 C18orf12Q96KH6 178 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 PGLYRP4Q96LB8 373 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 CDX2Q99626 313 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 MEIS3Q99687 375 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 VPS25Q9BRG1 176 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 SRXN1Q9BYN0 137 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 R3HDMLQ9H3Y0 253 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 ISG20L2Q9H9L3 353 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 SH2D2AQ9NP31 389 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 PLSCR3Q9NRY6 295 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 DEPPQ9NTK1 212 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 TAAR2Q9P1P5 351 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 VAX2Q9UIW0 290 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 ST3GAL6Q9Y274 331 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 FBXO7Q9Y3I1 522 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 UBIAD1Q9Y5Z9 338 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 ADAMTSL3P82987 1691 aa4.05□□□□□ -1.76
TOPBP1-210ENST00000572787 CACNA1FO60840 1977 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms