RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 RFPL4AA6NLU0 287 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 RFPL4AL1F8VTS6 287 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 XPNPEP2O43895 674 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 VENTXO95231 258 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 IGHV4-38-2P0DP08 117 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 NDUFB7P17568 137 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 PRKACBP22694 351 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 AZGP1P25311 298 aaKnown RBP17.1■□□□□ 0.33
CHMP6-204ENST00000572778 ATP1B3P54709 279 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 MTCP1P56278 107 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 ARF6P62330 175 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 ST3GAL4Q11206 333 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 KRTAP24-1Q3LI83 254 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 LAIR2Q6ISS4 152 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 DNAAF1Q8NEP3 725 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 TMEM185AQ8NFB2 350 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 OR13C9Q8NGT0 318 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 TSEN15Q8WW01 171 aaKnown RBP17.1■□□□□ 0.33
CHMP6-204ENST00000572778 SLAMF9Q96A28 289 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 MS4A7Q9GZW8 240 aaPredicted RBP17.1■□□□□ 0.33
CHMP6-204ENST00000572778 CNTD2Q9H8S5 307 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 ZNF222Q9UK12 451 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 DHDHQ9UQ10 334 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 MAB21L2Q9Y586 359 aa17.1■□□□□ 0.33
CHMP6-204ENST00000572778 TRAV40A0A0B4J280 105 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 EFCAB10A6NFE3 127 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 TOX4O94842 621 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 SFTPBP07988 381 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 PRDX2P32119 198 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 CAPZA1P52907 286 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 AQP4P55087 323 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 METTL11BQ5VVY1 283 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 XAF1Q6GPH4 301 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 SLC25A26Q70HW3 274 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 BCL6BQ8N143 479 aaPredicted RBP17.09■□□□□ 0.33
CHMP6-204ENST00000572778 ZNRF1Q8ND25 227 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 FBLIM1Q8WUP2 373 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 GATAD2BQ8WXI9 593 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 WDFY2Q96P53 400 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 BABAM2Q9NXR7 383 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 MTCH1Q9NZJ7 389 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 OR14J1Q9UGF5 321 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 WNK2Q9Y3S1 2297 aa17.09■□□□□ 0.33
CHMP6-204ENST00000572778 FBN1P35555 2871 aaKnown RBP17.08■□□□□ 0.33
CHMP6-204ENST00000572778 MXRA5Q9NR99 2828 aa17.08■□□□□ 0.33
CHMP6-204ENST00000572778 CYB5AP00167 134 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 PIPP12273 146 aaPredicted RBP17.08■□□□□ 0.32
CHMP6-204ENST00000572778 POU3F4P49335 361 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 CEBPDP49716 269 aaPredicted RBP17.08■□□□□ 0.32
CHMP6-204ENST00000572778 ERVK11-1P61568 191 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 CDK5R1Q15078 307 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 CCDC58Q4VC31 144 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 RPL22L1Q6P5R6 122 aaKnown RBP17.08■□□□□ 0.32
CHMP6-204ENST00000572778 LHFPL2Q6ZUX7 228 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 USP43Q70EL4 1123 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 PHC2Q8IXK0 858 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 STX19Q8N4C7 294 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 CD177Q8N6Q3 437 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 SPSB1Q96BD6 273 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 SDSLQ96GA7 329 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 CEP19Q96LK0 163 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 OPALINQ96PE5 141 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 DCTN5Q9BTE1 182 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 ZCCHC4Q9H5U6 513 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 HES4Q9HCC6 221 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 PLCXD1Q9NUJ7 323 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 CNOT2Q9NZN8 540 aaKnown RBP17.08■□□□□ 0.32
CHMP6-204ENST00000572778 ONECUT1Q9UBC0 465 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 PSORS1C1Q9UIG5 152 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 ATRQ13535 2644 aa17.08■□□□□ 0.32
CHMP6-204ENST00000572778 H0YJX3 145 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 SLC1A7O00341 560 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 MMP9P14780 707 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 SOX2P48431 317 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 GPR157Q5UAW9 335 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 RBMS3Q6XE24 437 aaKnown RBP17.07■□□□□ 0.32
CHMP6-204ENST00000572778 AHSA2Q719I0 299 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 SERPINA12Q8IW75 414 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 LY6G5BQ8NDX9 201 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 OR5D14Q8NGL3 314 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 OR52N1Q8NH53 320 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 RFT1Q96AA3 541 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 JMJD8Q96S16 334 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 TBX15Q96SF7 602 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 ELL3Q9HB65 397 aaPredicted RBP17.07■□□□□ 0.32
CHMP6-204ENST00000572778 NEK6Q9HC98 313 aa17.07■□□□□ 0.32
CHMP6-204ENST00000572778 F8VVB4 439 aa17.06■□□□□ 0.32
CHMP6-204ENST00000572778 F8VWA3 439 aa17.06■□□□□ 0.32
CHMP6-204ENST00000572778 KNG1P01042 644 aa17.06■□□□□ 0.32
CHMP6-204ENST00000572778 CAV3P56539 151 aa17.06■□□□□ 0.32
CHMP6-204ENST00000572778 HILS1P60008 231 aa17.06■□□□□ 0.32
CHMP6-204ENST00000572778 MKXQ8IYA7 352 aa17.06■□□□□ 0.32
CHMP6-204ENST00000572778 SIGLECL1Q8N7X8 197 aa17.06■□□□□ 0.32
CHMP6-204ENST00000572778 SPACA5Q96QH8 159 aa17.06■□□□□ 0.32
CHMP6-204ENST00000572778 SIRPDQ9H106 197 aa17.06■□□□□ 0.32
CHMP6-204ENST00000572778 VCX3BQ9H321 246 aa17.06■□□□□ 0.32
CHMP6-204ENST00000572778 SIRT4Q9Y6E7 314 aaPredicted RBP17.06■□□□□ 0.32
CHMP6-204ENST00000572778 A0A1W2PQ09 198 aa17.05■□□□□ 0.32
CHMP6-204ENST00000572778 OGG1O15527 345 aa17.05■□□□□ 0.32
CHMP6-204ENST00000572778 SPRY1O43609 319 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms