RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SF3B6Q9Y3B4 125 aaKnown RBP14.72□□□□□ -0.05
CHD3-214ENST00000572579 AP4S1Q9Y587 144 aa14.72□□□□□ -0.05
CHD3-214ENST00000572579 SNX5Q9Y5X3 404 aa14.72□□□□□ -0.05
CHD3-214ENST00000572579 ZNF670-ZNF695F2Z2N8 137 aa14.71□□□□□ -0.05
CHD3-214ENST00000572579 H3BUX3 64 aa14.71□□□□□ -0.05
CHD3-214ENST00000572579 ANGPTL7O43827 346 aa14.71□□□□□ -0.05
CHD3-214ENST00000572579 TGFBR2P37173 567 aa14.71□□□□□ -0.05
CHD3-214ENST00000572579 DYNAPQ8N1N2 210 aa14.71□□□□□ -0.05
CHD3-214ENST00000572579 PRSS35Q8N3Z0 413 aa14.71□□□□□ -0.05
CHD3-214ENST00000572579 ZNF561Q8N587 486 aa14.71□□□□□ -0.05
CHD3-214ENST00000572579 MNTQ99583 582 aa14.71□□□□□ -0.05
CHD3-214ENST00000572579 SSX3Q99909 188 aa14.71□□□□□ -0.05
CHD3-214ENST00000572579 MTCH1Q9NZJ7 389 aa14.71□□□□□ -0.05
CHD3-214ENST00000572579 MEX3AA1L020 520 aaKnown RBP14.7□□□□□ -0.06
CHD3-214ENST00000572579 ZNF737O75373 536 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 PAHP00439 452 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 FASP25445 335 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 HTR1FP30939 366 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 BMXP51813 675 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 CAPZA1P52907 286 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 BLMHQ13867 455 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 LY6EQ16553 131 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 SMIM21Q3B7S5 101 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 ZDHHC13Q8IUH4 622 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 RDH10Q8IZV5 341 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 OR5D13Q8NGL4 314 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 OR2T27Q8NH04 317 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 OR5R1Q8NH85 324 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 TRMT10AQ8TBZ6 339 aaKnown RBP14.7□□□□□ -0.06
CHD3-214ENST00000572579 MMP27Q9H306 513 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 MOB1AQ9H8S9 216 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 TCF7L1Q9HCS4 588 aa14.7□□□□□ -0.06
CHD3-214ENST00000572579 DHRS7CA6NNS2 312 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 M0QZ24 198 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 CHST1O43916 411 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 NXPH2O95156 264 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 TK1P04183 234 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 ISL1P61371 349 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 ZNF85Q03923 595 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 TCF23Q7RTU1 214 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 LHFPL4Q7Z7J7 247 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 EME1Q96AY2 570 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 GABARAPL3Q9BY60 117 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 FBLN5Q9UBX5 448 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 OR14J1Q9UGF5 321 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 WARS2Q9UGM6 360 aaKnown RBP14.69□□□□□ -0.06
CHD3-214ENST00000572579 OAZ3Q9UMX2 235 aa14.69□□□□□ -0.06
CHD3-214ENST00000572579 FAM230AA0A1W2PPH8 454 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 TMEM82A0PJX8 343 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 BTBD17A6NE02 478 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 ANKRD61A6NGH8 418 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 METTL15A6NJ78 407 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 FAM90A8PA6NJQ4 464 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 E9PQ18 207 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 K7N7A8 449 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 TIMM23O14925 209 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 OR2T7P0C7T2 308 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 PIPP12273 146 aaPredicted RBP14.68□□□□□ -0.06
CHD3-214ENST00000572579 COX7A1P24310 79 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 KIR3DL2P43630 455 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 COL10A1Q03692 680 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 IL24Q13007 206 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 GID4Q8IVV7 300 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 YIPF7Q8N8F6 280 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 PRRG3Q9BZD7 231 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 PKIBQ9C010 78 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 IL36RNQ9UBH0 155 aa14.68□□□□□ -0.06
CHD3-214ENST00000572579 IGKV1-9A0A0C4DH69 117 aa14.67□□□□□ -0.06
CHD3-214ENST00000572579 C17orf98A8MV24 154 aa14.67□□□□□ -0.06
CHD3-214ENST00000572579 SLC1A7O00341 560 aa14.67□□□□□ -0.06
CHD3-214ENST00000572579 KRT8P05787 483 aa14.67□□□□□ -0.06
CHD3-214ENST00000572579 RAB13P51153 203 aa14.67□□□□□ -0.06
CHD3-214ENST00000572579 ACTR3P61158 418 aa14.67□□□□□ -0.06
CHD3-214ENST00000572579 CCBE1Q6UXH8 406 aaPredicted RBP14.67□□□□□ -0.06
CHD3-214ENST00000572579 ZNF782Q6ZMW2 699 aaPredicted RBP14.67□□□□□ -0.06
CHD3-214ENST00000572579 RNF144BQ7Z419 303 aa14.67□□□□□ -0.06
CHD3-214ENST00000572579 OR10H4Q8NGA5 316 aa14.67□□□□□ -0.06
CHD3-214ENST00000572579 OSBPL10Q9BXB5 764 aa14.67□□□□□ -0.06
CHD3-214ENST00000572579 FOXJ3Q9UPW0 622 aa14.67□□□□□ -0.06
CHD3-214ENST00000572579 POLDIP2Q9Y2S7 368 aa14.67□□□□□ -0.06
CHD3-214ENST00000572579 J3QRE1 110 aa14.66□□□□□ -0.06
CHD3-214ENST00000572579 SYT7O43581 403 aa14.66□□□□□ -0.06
CHD3-214ENST00000572579 INMTO95050 263 aa14.66□□□□□ -0.06
CHD3-214ENST00000572579 JUNBP17275 347 aaPredicted RBP14.66□□□□□ -0.06
CHD3-214ENST00000572579 GABRA5P31644 462 aa14.66□□□□□ -0.06
CHD3-214ENST00000572579 EFNB2P52799 333 aa14.66□□□□□ -0.06
CHD3-214ENST00000572579 LRRC75BQ2VPJ9 315 aa14.66□□□□□ -0.06
CHD3-214ENST00000572579 C1orf146Q5VVC0 180 aa14.66□□□□□ -0.06
CHD3-214ENST00000572579 OR52N4Q8NGI2 321 aa14.66□□□□□ -0.06
CHD3-214ENST00000572579 FAM110DQ8TAY7 271 aaPredicted RBP14.66□□□□□ -0.06
CHD3-214ENST00000572579 SLAMF9Q96A28 289 aa14.66□□□□□ -0.06
CHD3-214ENST00000572579 FAM234AQ9H0X4 552 aa14.66□□□□□ -0.06
CHD3-214ENST00000572579 RIBC2Q9H4K1 309 aa14.66□□□□□ -0.06
CHD3-214ENST00000572579 HEXA-AS1Q9H8Q6 139 aa14.66□□□□□ -0.06
CHD3-214ENST00000572579 SAC3D1A6NKF1 404 aa14.65□□□□□ -0.06
CHD3-214ENST00000572579 SULT1C4O75897 302 aa14.65□□□□□ -0.06
CHD3-214ENST00000572579 KIR2DS4P43632 304 aa14.65□□□□□ -0.06
CHD3-214ENST00000572579 AANATQ16613 207 aa14.65□□□□□ -0.06
CHD3-214ENST00000572579 TP53I3Q53FA7 332 aa14.65□□□□□ -0.06
CHD3-214ENST00000572579 SLC25A26Q70HW3 274 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms