RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 DHHO43323 396 aa9.41□□□□□ -0.9
CCDC40-207ENST00000572253 EIF1BO60739 113 aaKnown RBP9.41□□□□□ -0.9
CCDC40-207ENST00000572253 RAMP1O60894 148 aa9.41□□□□□ -0.9
CCDC40-207ENST00000572253 FABP1P07148 127 aa9.41□□□□□ -0.9
CCDC40-207ENST00000572253 OR5AC1P0C628 307 aa9.41□□□□□ -0.9
CCDC40-207ENST00000572253 SHBQ15464 509 aa9.41□□□□□ -0.9
CCDC40-207ENST00000572253 TAF9Q16594 264 aa9.41□□□□□ -0.9
CCDC40-207ENST00000572253 CYYR1Q96J86 154 aa9.41□□□□□ -0.9
CCDC40-207ENST00000572253 GINS3Q9BRX5 216 aa9.41□□□□□ -0.9
CCDC40-207ENST00000572253 FAAP24Q9BTP7 215 aa9.41□□□□□ -0.9
CCDC40-207ENST00000572253 ARV1Q9H2C2 271 aa9.41□□□□□ -0.9
CCDC40-207ENST00000572253 ZNF286AQ9HBT8 521 aa9.41□□□□□ -0.9
CCDC40-207ENST00000572253 NXT1Q9UKK6 140 aaKnown RBP9.41□□□□□ -0.9
CCDC40-207ENST00000572253 FAM230AA0A1W2PPH8 454 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 A6NLC8 198 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 FAM157AC9JC47 383 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 VAMP5O95183 116 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 IFNA17P01571 189 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 RAB5AP20339 215 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 OPRM1P35372 400 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 SP6Q3SY56 376 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 SLC16A13Q7RTY0 426 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 HSD17B11Q8NBQ5 300 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 SMRP1Q8NCR6 262 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 SLC35B3Q9H1N7 401 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 NIT2Q9NQR4 276 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 RARRES3Q9UL19 164 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 HSF4Q9ULV5 492 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 TRANK1O15050 2925 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 A0A1W2PPH5 198 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 XRCC2O43543 280 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 SCRG1O75711 98 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 IGLV3-1P01715 115 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 PTGDSP41222 190 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 TMEM187Q14656 261 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 PHLDA2Q53GA4 152 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 C10orf128Q5T292 105 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 LIAT1Q6ZQX7 453 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 ZNF565Q8N9K5 539 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 BORCS8Q96FH0 119 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 GALNT14Q96FL9 552 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 TAAR9Q96RI9 348 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 MESP1Q9BRJ9 268 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 C20orf24Q9BUV8 137 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 ULBP2Q9BZM5 246 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 UNKLQ9H9P5 680 aaKnown RBP9.4□□□□□ -0.9
CCDC40-207ENST00000572253 PLA2G2EQ9NZK7 142 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 METTL1Q9UBP6 276 aaKnown RBP9.4□□□□□ -0.9
CCDC40-207ENST00000572253 AK3Q9UIJ7 227 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 A0A087WZY1 265 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 SHISA7A6NL88 538 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 H7C1Q1 480 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 AGAP20933 346 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 FABP9Q0Z7S8 132 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 WDR77Q9BQA1 342 aaPredicted RBP9.4□□□□□ -0.9
CCDC40-207ENST00000572253 CHRDQ9H2X0 955 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 DECR2Q9NUI1 292 aa9.4□□□□□ -0.9
CCDC40-207ENST00000572253 NSG1A0A0A6YYJ2 146 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 C5orf63A6NC05 138 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 E9PLN8 166 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 MYF5P13349 255 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 ANOS1P23352 680 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 ENDOGQ14249 297 aaKnown RBP9.39□□□□□ -0.91
CCDC40-207ENST00000572253 CLEC9AQ6UXN8 241 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 SUMF2Q8NBJ7 301 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 FAM213BQ8TBF2 198 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 OR6C1Q96RD1 312 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 FBXO7Q9Y3I1 522 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 MTCH2Q9Y6C9 303 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 SRPXP78539 464 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 SOHLH1Q5JUK2 328 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 PRAMEF20Q5VT98 475 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 LYZL2Q7Z4W2 148 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 OR5L1Q8NGL2 311 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 ISOC2Q96AB3 205 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 INTS12Q96CB8 462 aaKnown RBP9.39□□□□□ -0.91
CCDC40-207ENST00000572253 NTNG2Q96CW9 530 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 BCO1Q9HAY6 547 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 B3GALT1Q9Y5Z6 326 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 BRWD1Q9NSI6 2320 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 TOX3O15405 576 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-207ENST00000572253 ANGPTL7O43827 346 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 ITGA3P26006 1051 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 LTBRP36941 435 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 PMELP40967 661 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 RBP2P50120 134 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 AFF3P51826 1226 aaKnown RBP9.39□□□□□ -0.91
CCDC40-207ENST00000572253 RRADP55042 308 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 ADAM5Q6NVV9 412 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 SLC22A25Q6T423 547 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 MAML2Q8IZL2 1156 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-207ENST00000572253 ZMAT5Q9UDW3 170 aaKnown RBP9.39□□□□□ -0.91
CCDC40-207ENST00000572253 TMED3Q9Y3Q3 217 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 PHF1O43189 567 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-207ENST00000572253 HSPA12AO43301 675 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 S100PP25815 95 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 SULT1A1P50225 295 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 ZNF266Q14584 549 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 CLINT1Q14677 625 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 RAET1LQ5VY80 246 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms