RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 PRSS22Q9GZN4 317 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 NAA50Q9GZZ1 169 aaKnown RBP5.53□□□□□ -1.52
CHD3-213ENST00000571249 FGF20Q9NP95 211 aaPredicted RBP5.53□□□□□ -1.52
CHD3-213ENST00000571249 KRCC1Q9NPI7 259 aaPredicted RBP5.53□□□□□ -1.52
CHD3-213ENST00000571249 LIN7CQ9NUP9 197 aaKnown RBP5.53□□□□□ -1.52
CHD3-213ENST00000571249 TMEM38BQ9NVV0 291 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 ONECUT1Q9UBC0 465 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 RPL36Q9Y3U8 105 aaKnown RBP5.53□□□□□ -1.52
CHD3-213ENST00000571249 CDH10Q9Y6N8 788 aa5.53□□□□□ -1.52
CHD3-213ENST00000571249 LOC100509620A0A075B734 347 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 LOC102725191A0A1B0GVB3 256 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 IRGMA1A4Y4 181 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 FAM90A20PA6NIJ5 464 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 NOTOA8MTQ0 251 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 MS4A18H0YCH9 400 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 H3BN98 237 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 ADAM20O43506 726 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 PRKYO43930 277 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 NOL3O60936 208 aaKnown RBP5.52□□□□□ -1.53
CHD3-213ENST00000571249 ENTPD6O75354 484 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 SOX14O95416 240 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 HMGN1P05114 100 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 MMP7P09237 267 aaPredicted RBP5.52□□□□□ -1.53
CHD3-213ENST00000571249 SPARCP09486 303 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 FSTP19883 344 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 POU1F1P28069 291 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 C21orf33P30042 268 aaPredicted RBP5.52□□□□□ -1.53
CHD3-213ENST00000571249 GRPRP30550 384 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 THBS3P49746 956 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 GDI2P50395 445 aaKnown RBP5.52□□□□□ -1.53
CHD3-213ENST00000571249 FXYD6P3P58550 94 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 HOXA4Q00056 320 aaPredicted RBP5.52□□□□□ -1.53
CHD3-213ENST00000571249 HOXC5Q00444 222 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 TMED1Q13445 227 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 AQP6Q13520 282 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 PABPC1L2AQ5JQF8 200 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 AADACL4Q5VUY2 407 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 ULK3Q6PHR2 472 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 C10orf99Q6UWK7 81 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 RRM2BQ7LG56 351 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 ZNF367Q7RTV3 350 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 CENPVQ7Z7K6 275 aaPredicted RBP5.52□□□□□ -1.53
CHD3-213ENST00000571249 LRRC18Q8N456 261 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 STPG3Q8N7X2 389 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 TCEANCQ8N8B7 351 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 TEX47Q8TBZ9 253 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 TMEM255BQ8WV15 326 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 DNAJA4Q8WW22 397 aaPredicted RBP5.52□□□□□ -1.53
CHD3-213ENST00000571249 TMEM239Q8WW34 195 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 LIPHQ8WWY8 451 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 CCDC90BQ9GZT6 254 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 FN3KQ9H479 309 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 C12orf10Q9HB07 376 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 TMEM27Q9HBJ8 222 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 ISYNA1Q9NPH2 558 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 ING3Q9NXR8 418 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 SLC7A7Q9UM01 511 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 DIMT1Q9UNQ2 313 aaKnown RBP5.52□□□□□ -1.53
CHD3-213ENST00000571249 BAIAP2Q9UQB8 552 aa5.52□□□□□ -1.53
CHD3-213ENST00000571249 LSM2Q9Y333 95 aaKnown RBP5.52□□□□□ -1.53
CHD3-213ENST00000571249 A0A1B0GWA3 101 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 UNC119BA6NIH7 251 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 SNTNA6NMZ2 147 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 BHLHE40O14503 412 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 CDC42EP2O14613 210 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 PSPNO60542 156 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 FCN3O75636 299 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 FADS2O95864 444 aaKnown RBP5.51□□□□□ -1.53
CHD3-213ENST00000571249 ECDO95905 644 aaPredicted RBP5.51□□□□□ -1.53
CHD3-213ENST00000571249 ALDOBP05062 364 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 GKN3PP0CG01 181 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 ADORA3P0DMS8 318 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 DBTP11182 482 aaKnown RBP5.51□□□□□ -1.53
CHD3-213ENST00000571249 IRF2P14316 349 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 SLC9A3P48764 834 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 SRP9P49458 86 aaKnown RBP5.51□□□□□ -1.53
CHD3-213ENST00000571249 UBE2E1P51965 193 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 COPZ1P61923 177 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 BLCAPP62952 87 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 EGR4Q05215 589 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 ZNF91Q05481 1191 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 ACSM1Q08AH1 577 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 RAB40BQ12829 278 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 FHL1Q13642 323 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 AANATQ16613 207 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 ZNF181Q2M3W8 571 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 MS4A18Q3C1V0 323 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 NXNL2Q5VZ03 156 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 SFRP4Q6FHJ7 346 aaPredicted RBP5.51□□□□□ -1.53
CHD3-213ENST00000571249 WBP2NLQ6ICG8 309 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 ARL9Q6T311 187 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 C18orf65Q6ZTR6 163 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 CMTM4Q8IZR5 234 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 LNX2Q8N448 690 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 STX19Q8N4C7 294 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 NANOGP1Q8N7R0 232 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 MAPKAPK5-AS1Q8N8E1 139 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 PROKR2Q8NFJ6 384 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 OR2T33Q8NG76 320 aa5.51□□□□□ -1.53
CHD3-213ENST00000571249 OR10AD1Q8NGE0 317 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms