RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 A0A1B0GTI1 187 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 hCG_1809904A0A1W2PP81 198 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 A0A1W2PPE2 198 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 A0A1W2PPH5 198 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 A0A1W2PR64 198 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 A0A1W2PRV1 198 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 A0A1W2PRX2 142 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 PQLC2LA1A4F0 135 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 FAM90A8PA6NJQ4 464 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 ACOD1A6NK06 481 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 F8VVB4 439 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 F8VWA3 439 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 PIN1P1O15428 100 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 ATP8B1O43520 1251 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 RPP14O95059 124 aaKnown RBP6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 ANXA8P13928 327 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 ATP6V1B1P15313 513 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 CALB2P22676 271 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 CRISP1P54107 249 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 DLX6P56179 175 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 EDDM3BP56851 147 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 CXCR4P61073 352 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 CBX1P83916 185 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 ROM1Q03395 351 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 GK3PQ14409 553 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 EDDM3AQ14507 147 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 AANATQ16613 207 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 ARSJQ5FYB0 599 aaPredicted RBP6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 KPRPQ5T749 579 aaPredicted RBP6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 BCL2L15Q5TBC7 163 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 LCN1P1Q5VSP4 162 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 C11orf88Q6PI97 169 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 DEGS2Q6QHC5 323 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 KRT74Q7RTS7 529 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 SLC35F2Q8IXU6 374 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 TPRX1Q8N7U7 411 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 OR14K1Q8NGZ2 314 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 MRAPQ8TCY5 172 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 SGCDQ92629 289 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 CNN2Q99439 309 aaKnown RBP6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 TBX5Q99593 518 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 CDCA4Q9BXL8 241 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 TEX12Q9BXU0 123 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 SLC25A19Q9HC21 320 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 ABCB10Q9NRK6 738 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 OR52A1Q9UKL2 312 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 TCF19Q9Y242 345 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 HILPDAQ9Y5L2 63 aa6.95□□□□□ -1.3
CTDNEP1-203ENST00000570385 A6NDX4 124 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 AQP12BA6NM10 295 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 C17orf98A8MV24 154 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 K7N7A8 449 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 MITFO75030 526 aaPredicted RBP6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 NOS1APO75052 506 aaPredicted RBP6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 FKBP6O75344 327 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 PEX14O75381 377 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 ZNF254O75437 659 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 SRSF10O75494 262 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 APOL3O95236 402 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 ZNF728P0DKX0 622 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 CALCBP10092 127 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 EPHA2P29317 976 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 BLCAPP62952 87 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 FLOT2Q14254 428 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 PTGES3Q15185 160 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 CNN3Q15417 329 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 TMEM42Q69YG0 159 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 SSX6Q7RTT6 188 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 AQP12AQ8IXF9 295 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 ELMOD2Q8IZ81 293 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 TCEANCQ8N8B7 351 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 CCDC197Q8NCU1 140 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 RPS4Y2Q8TD47 263 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 ASB17Q8WXJ9 295 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 SLAMF9Q96A28 289 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 IL4I1Q96RQ9 567 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 CADM1Q9BY67 442 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 PAPOLBQ9NRJ5 636 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 DNAJB9Q9UBS3 223 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 MRM2Q9UI43 246 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 POLDIP2Q9Y2S7 368 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 TMEM14AQ9Y6G1 99 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 R4GMQ9 66 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 V9GYS6 101 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 DSCAML1Q8TD84 2053 aa6.94□□□□□ -1.3
CTDNEP1-203ENST00000570385 IGKV1-27A0A075B6S5 117 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 TMEM82A0PJX8 343 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 ADARB2-AS1A8MUL3 147 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 VGLL3A8MV65 326 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 ODF3BA8MYP8 253 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 ZNF670-ZNF695F2Z2N8 137 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 DLGAP1O14490 977 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 ZNF737O75373 536 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 ALX3O95076 343 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 IGHA1P01876 353 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 IGHV1-8P0DP01 117 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 CD24P25063 80 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 DUSP1P28562 367 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 DAPP51397 102 aa6.93□□□□□ -1.3
CTDNEP1-203ENST00000570385 SNU13P55769 128 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms