RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 RIPPLY1Q0D2K3 151 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 APOFQ13790 326 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 EDDM3AQ14507 147 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 ZNF626Q68DY1 528 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 BAIAP2L2Q6UXY1 529 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 ANGPTL5Q86XS5 388 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 CALHM1Q8IU99 346 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 ZNF454Q8N9F8 522 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 OR5A2Q8NGI9 324 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 OCSTAMPQ9BR26 566 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 ACTR3BQ9P1U1 418 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 SACSQ9NZJ4 4579 aa9.68□□□□□ -0.86
CAPN3-220ENST00000569827 A0A0U1RQV5 110 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 hCG_1809904A0A1W2PP81 198 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 A0A1W2PPE2 198 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 A0A1W2PR64 198 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 A0A1W2PRV1 198 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 ZNF728P0DKX0 622 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 IGHV1-8P0DP01 117 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 ALOX5APP20292 161 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 CD83Q01151 205 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 MS4A2Q01362 244 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 ZNF684Q5T5D7 378 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 OR13D1Q8NGV5 346 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 NDNFQ8TB73 568 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 BCAS4Q8TDM0 211 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 GIPC3Q8TF64 312 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 FOXRED1Q96CU9 486 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-220ENST00000569827 NRIP2Q9BQI9 281 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 RASL12Q9NYN1 266 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 IL36RNQ9UBH0 155 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 TAGLN3Q9UI15 199 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 ENPP5Q9UJA9 477 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 IKZF2Q9UKS7 526 aa9.67□□□□□ -0.86
CAPN3-220ENST00000569827 TBL2Q9Y4P3 447 aaKnown RBP9.67□□□□□ -0.86
CAPN3-220ENST00000569827 TCRBV4S1A1TA0A5B7 111 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 CCDC182A6NF36 153 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 M0R129 80 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 SNX3O60493 162 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 IGLV3-1P01715 115 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 IGHA1P01876 353 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 TTRP02766 147 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 CCDC159P0C7I6 412 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 CALCBP10092 127 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 SNU13P55769 128 aaKnown RBP9.66□□□□□ -0.86
CAPN3-220ENST00000569827 OR12D2P58182 307 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 ACTA2P62736 377 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 ACTG2P63267 376 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 ACTC1P68032 377 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 ACTA1P68133 377 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 ODF4Q2M2E3 257 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 LCN8Q6JVE9 175 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 C16orf89Q6UX73 402 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 BCDIN3DQ7Z5W3 292 aaKnown RBP9.66□□□□□ -0.86
CAPN3-220ENST00000569827 WFDC9Q8NEX5 89 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 MYDGFQ969H8 173 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 MALSU1Q96EH3 234 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 CHST6Q9GZX3 395 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 INPP5EQ9NRR6 644 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 PITPNC1Q9UKF7 332 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 SLC22A13Q9Y226 551 aa9.66□□□□□ -0.86
CAPN3-220ENST00000569827 FAM230AA0A1W2PPH8 454 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 TMEM82A0PJX8 343 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 PQLC2LA1A4F0 135 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 K7N7A8 449 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 PRODHO43272 600 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 ZNF737O75373 536 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 MMP23AO75900 390 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 DHRS3O75911 302 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 LPLP06858 475 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 PRKACGP22612 351 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 ABCA11PQ4W5N1 156 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 HSP90B2PQ58FF3 399 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 CD300LDQ6UXZ3 194 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 CENPVQ7Z7K6 275 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-220ENST00000569827 DHFR2Q86XF0 187 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 ZNF573Q86YE8 665 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 ZNF676Q8N7Q3 588 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 OR11H6Q8NGC7 330 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 SLAMF9Q96A28 289 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 CCDC124Q96CT7 223 aaKnown RBP9.65□□□□□ -0.86
CAPN3-220ENST00000569827 ZNF714Q96N38 554 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 APOL4Q9BPW4 351 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 CADM1Q9BY67 442 aaKnown RBP9.65□□□□□ -0.86
CAPN3-220ENST00000569827 MAGIXQ9H6Y5 334 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 HES4Q9HCC6 221 aa9.65□□□□□ -0.86
CAPN3-220ENST00000569827 IGKV1-27A0A075B6S5 117 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 IGHV2-26A0A0B4J1V2 119 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 LOC110117498-PIK3R3F6TDL0 507 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 SRSF10O75494 262 aaKnown RBP9.64□□□□□ -0.87
CAPN3-220ENST00000569827 CST1P01037 141 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 DUSP1P28562 367 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 RIDAP52758 137 aaKnown RBP9.64□□□□□ -0.87
CAPN3-220ENST00000569827 SLC35A2P78381 396 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 CD69Q07108 199 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 FAM98BQ52LJ0 330 aaKnown RBP9.64□□□□□ -0.87
CAPN3-220ENST00000569827 C9orf152Q5JTZ5 239 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 CLVS2Q5SYC1 327 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 PRAMEF5Q5TYX0 476 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 C18orf65Q6ZTR6 163 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms