RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CCL19Q99731 98 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 QTRT1Q9BXR0 403 aaKnown RBP5.82□□□□□ -1.48
SMG1-217ENST00000569764 SHARPINQ9H0F6 387 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 OR52A1Q9UKL2 312 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 NSG2Q9Y328 171 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 AKAP9Q99996 3911 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 TRBV5-3A0A0A0MS03 114 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 ZNF587BE7ETH6 402 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 SOCS2O14508 198 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 ARPC2O15144 300 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 DAOP14920 347 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 C4BPBP20851 252 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 TIA1P31483 386 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMG1-217ENST00000569764 GABRA3P34903 492 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 APLNRP35414 380 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 RPL4P36578 427 aaKnown RBP5.82□□□□□ -1.48
SMG1-217ENST00000569764 PDLIM4P50479 330 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 ERVFRD-1P60508 538 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 APOFQ13790 326 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 C6orf226Q5I0X4 101 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 ZNF787Q6DD87 383 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 TMPRSS11FQ6ZWK6 438 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 VN1R5Q7Z5H4 357 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 DTWD1Q8N5C7 304 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 OR7A2PQ8NGA2 310 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 LGALS14Q8TCE9 139 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 MRPL53Q96EL3 112 aaKnown RBP5.82□□□□□ -1.48
SMG1-217ENST00000569764 REEP6Q96HR9 211 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 B3GAT1Q9P2W7 334 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 A4GNTQ9UNA3 340 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 WDR45Q9Y484 360 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 HS3ST3B1Q9Y662 390 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 SPTAN1Q13813 2472 aaKnown RBP5.82□□□□□ -1.48
SMG1-217ENST00000569764 TRAV8-7A0A075B6U6 113 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 SAP18O00422 153 aaKnown RBP5.82□□□□□ -1.48
SMG1-217ENST00000569764 TPST1O60507 370 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 ZG16O60844 167 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 CD2P06729 351 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 ZNF43P17038 809 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 GZMMP51124 257 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 ANKRD16Q6P6B7 361 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 DUX4L9Q6RFH8 374 aaPredicted RBP5.82□□□□□ -1.48
SMG1-217ENST00000569764 TFAP2EQ6VUC0 442 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 OLIG3Q7RTU3 272 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 SFTPA2Q8IWL1 248 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 OR52L1Q8NGH7 329 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 C11orf40Q8WZ69 217 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 PELI1Q96FA3 418 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 Q96MT0 163 aa5.82□□□□□ -1.48
SMG1-217ENST00000569764 FOXA2Q9Y261 457 aaPredicted RBP5.82□□□□□ -1.48
SMG1-217ENST00000569764 J3QLI3 93 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 SEMA7AO75326 666 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 EML2O95834 649 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 H2AFB1P0C5Y9 115 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 RAB5CP51148 216 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 RAP1BP61224 184 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 DRAM2Q6UX65 266 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 PKD1L2Q7Z442 2459 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 OR2M7Q8NG81 312 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 YIPF6Q96EC8 236 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 SIGMAR1Q99720 223 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 GPA33Q99795 319 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 URM1Q9BTM9 101 aaKnown RBP5.81□□□□□ -1.48
SMG1-217ENST00000569764 AMBNQ9NP70 447 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 RNF115Q9Y4L5 304 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 SEC16AO15027 2179 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 MBD3L4A6NDZ8 208 aaPredicted RBP5.81□□□□□ -1.48
SMG1-217ENST00000569764 MBD3L3A6NE82 208 aaPredicted RBP5.81□□□□□ -1.48
SMG1-217ENST00000569764 UPK1AO00322 258 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 CDS2O95674 445 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 CRYBA2P53672 197 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 ST3GAL3Q11203 375 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 RAB39AQ14964 217 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 NKPD1Q17RQ9 610 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 HIST2H3PS2Q5TEC6 136 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 NOXRED1Q6NXP6 359 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 FAHD1Q6P587 224 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 KIRREL2Q6UWL6 708 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 PLXDC2Q6UX71 529 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 ROPN1LQ96C74 230 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 FLYWCH2Q96CP2 140 aaKnown RBP5.81□□□□□ -1.48
SMG1-217ENST00000569764 RAB3CQ96E17 227 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 ZMYND19Q96E35 227 aaPredicted RBP5.81□□□□□ -1.48
SMG1-217ENST00000569764 ZNF488Q96MN9 340 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 NDUFAF3Q9BU61 184 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 SMIM3Q9BZL3 60 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 AICDAQ9GZX7 198 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 LAT2Q9GZY6 243 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 SLC17A5Q9NRA2 495 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 NINQ8N4C6 2090 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 LRP4O75096 1905 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 OR5H14A6NHG9 310 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 GIPP09681 153 aaPredicted RBP5.81□□□□□ -1.48
SMG1-217ENST00000569764 HSD17B1P14061 328 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 HTR2AP28223 471 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 CD96P40200 585 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 FABP6P51161 128 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 ZNF385BQ569K4 471 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 ZNF517Q6ZMY9 492 aaPredicted RBP5.81□□□□□ -1.48
SMG1-217ENST00000569764 CLECL1Q8IZS7 167 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms