RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ACTG2P63267 376 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 ACTC1P68032 377 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 ACTA1P68133 377 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 DNAL1Q4LDG9 190 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 ABCA11PQ4W5N1 156 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 CASC10Q5T4H9 136 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 OSR2Q8N2R0 312 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 LINC00471Q8N535 108 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 OR8B12Q8NGG6 310 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 OR4Q3Q8NH05 313 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 MUC7Q8TAX7 377 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 NDNFQ8TB73 568 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 ZNF488Q96MN9 340 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 ZNF649Q9BS31 505 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 TSSK6Q9BXA6 273 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 NIPAL2Q9H841 368 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 TBC1D23Q9NUY8 699 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 VNN3Q9NY84 501 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 V9GYQ6 96 aa9.93□□□□□ -0.82
SNX29-207ENST00000568949 DYNC2H1Q8NCM8 4307 aaKnown RBP9.92□□□□□ -0.82
SNX29-207ENST00000568949 IGHV2-26A0A0B4J1V2 119 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 J3QT63 122 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 NXPH2O95156 264 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 IFNGP01579 166 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 MYCNOSP40205 109 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 HMGA2P52926 109 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 LCN1P1Q5VSP4 162 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 ZBTB49Q6ZSB9 765 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 MOB3CQ70IA8 216 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 ZNF454Q8N9F8 522 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 ZNF714Q96N38 554 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 NRIP2Q9BQI9 281 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 HES4Q9HCC6 221 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 IL1RAPQ9NPH3 570 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 ACTR3BQ9P1U1 418 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 POLDIP2Q9Y2S7 368 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 SESN1Q9Y6P5 492 aa9.92□□□□□ -0.82
SNX29-207ENST00000568949 A0A0U1RQV5 110 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 PSMB11A5LHX3 300 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 ACOD1A6NK06 481 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 RIIAD1A6NNX1 92 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 GYG2O15488 501 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 DNAJC8O75937 253 aaPredicted RBP9.91□□□□□ -0.82
SNX29-207ENST00000568949 KRT36O76013 467 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 OR2F2O95006 317 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 AMY1AP04745 511 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 AMY2AP04746 511 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 FABP3P05413 133 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 LYNP07948 512 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 ZNF3P17036 446 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 HTR1DP28221 377 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 BRS3P32247 399 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 GP2P55259 537 aaKnown RBP9.91□□□□□ -0.82
SNX29-207ENST00000568949 EDDM3BP56851 147 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 RPL23AP62750 156 aaKnown RBP9.91□□□□□ -0.82
SNX29-207ENST00000568949 MEF2CQ06413 473 aaPredicted RBP9.91□□□□□ -0.82
SNX29-207ENST00000568949 RIPPLY1Q0D2K3 151 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 TRIM25Q14258 630 aaKnown RBP9.91□□□□□ -0.82
SNX29-207ENST00000568949 DMRTC1Q5HYR2 192 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 PLCXD3Q63HM9 321 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 ZNF573Q86YE8 665 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 OR2T33Q8NG76 320 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 OR9Q2Q8NGE9 314 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 OTOSQ8NHW6 89 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 TFAP2CQ92754 450 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 STMN2Q93045 179 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 LRGUKQ96M69 825 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 RBM14Q96PK6 669 aaKnown RBP9.91□□□□□ -0.82
SNX29-207ENST00000568949 P2RX4Q99571 388 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 BTBD10Q9BSF8 475 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 SLC25A33Q9BSK2 321 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 CLEC7AQ9BXN2 247 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 OR14J1Q9UGF5 321 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 SLC22A13Q9Y226 551 aa9.91□□□□□ -0.82
SNX29-207ENST00000568949 M0QZK8 103 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 ZNF737O75373 536 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 GASTP01350 101 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 HAAOP46952 286 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 ARHGDIBP52566 201 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 ZNF684Q5T5D7 378 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 GDPD3Q7L5L3 318 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 TCF23Q7RTU1 214 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 OR2W3Q7Z3T1 314 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 DHFR2Q86XF0 187 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 RNF148Q8N7C7 305 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 ZNF676Q8N7Q3 588 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 OR4P4Q8NGL7 312 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 THEM6Q8WUY1 208 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 ASB9Q96DX5 294 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 TMEM133Q9H2Q1 129 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 CMC2Q9NRP2 79 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 ZFP57Q9NU63 452 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 DPM3Q9P2X0 92 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 LYVE1Q9Y5Y7 322 aa9.9□□□□□ -0.82
SNX29-207ENST00000568949 LCE6AA0A183 80 aa9.89□□□□□ -0.83
SNX29-207ENST00000568949 hADV38S2A0JD32 116 aa9.89□□□□□ -0.83
SNX29-207ENST00000568949 MEX3AA1L020 520 aaKnown RBP9.89□□□□□ -0.83
SNX29-207ENST00000568949 FAM183AA6NL82 134 aa9.89□□□□□ -0.83
SNX29-207ENST00000568949 ARPC2O15144 300 aa9.89□□□□□ -0.83
SNX29-207ENST00000568949 GSC2O15499 205 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms