RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 RHCGQ9UBD6 479 aa4.49□□□□□ -1.69
CDH13-211ENST00000568770 SLC25A10Q9UBX3 287 aaPredicted RBP4.49□□□□□ -1.69
CDH13-211ENST00000568770 ZNF391Q9UJN7 358 aa4.49□□□□□ -1.69
CDH13-211ENST00000568770 A4GNTQ9UNA3 340 aa4.49□□□□□ -1.69
CDH13-211ENST00000568770 TCF19Q9Y242 345 aa4.49□□□□□ -1.69
CDH13-211ENST00000568770 HUWE1Q7Z6Z7 4374 aaKnown RBP4.49□□□□□ -1.69
CDH13-211ENST00000568770 TMEM272A0A1B0GTI8 110 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 A6NDX4 124 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 SH2D7A6NKC9 451 aaPredicted RBP4.48□□□□□ -1.69
CDH13-211ENST00000568770 VGLL3A8MV65 326 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 SYNGR1O43759 233 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 GLCEO94923 617 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 CLIC3O95833 236 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 HLA-DQA2P01906 255 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 PAICSP22234 425 aaKnown RBP4.48□□□□□ -1.69
CDH13-211ENST00000568770 MDH1P40925 334 aaKnown RBP4.48□□□□□ -1.69
CDH13-211ENST00000568770 CDKN2AP42771 156 aaKnown RBP4.48□□□□□ -1.69
CDH13-211ENST00000568770 GPR4P46093 362 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 YAP1P46937 504 aaKnown RBP4.48□□□□□ -1.69
CDH13-211ENST00000568770 GZMMP51124 257 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 SLC18A1P54219 525 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 GMFBP60983 142 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 VSNL1P62760 191 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 CSNK2BP67870 215 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 ST3GAL3Q11203 375 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 DGUOKQ16854 277 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 RFX4Q33E94 735 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 ZBED5Q49AG3 693 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 GLYATL3Q5SZD4 288 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 DPY19L4Q7Z388 723 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 LHFPL4Q7Z7J7 247 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 MKXQ8IYA7 352 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 DYNAPQ8N1N2 210 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 SDR9C7Q8NEX9 313 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 OR8S1Q8NH09 359 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 MYDGFQ969H8 173 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 PRRC1Q96M27 445 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 GAFA1Q96PS6 74 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 CGREF1Q99674 301 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 ASCL2Q99929 193 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 EBF4Q9BQW3 602 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 GPR61Q9BZJ8 451 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 DNTTIP1Q9H147 329 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 WDR13Q9H1Z4 485 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 RNPEPL1Q9HAU8 725 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 ELL3Q9HB65 397 aaPredicted RBP4.48□□□□□ -1.69
CDH13-211ENST00000568770 PNRC2Q9NPJ4 139 aaKnown RBP4.48□□□□□ -1.69
CDH13-211ENST00000568770 HAO2Q9NYQ3 351 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 GTF2A1LQ9UNN4 478 aa4.48□□□□□ -1.69
CDH13-211ENST00000568770 TSSC4Q9Y5U2 329 aaPredicted RBP4.48□□□□□ -1.69
CDH13-211ENST00000568770 IGLV1-36A0A0B4J1U3 117 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 TMEM120BA0PK00 339 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 NKX6-3A6NJ46 265 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 M0R135 149 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 CDIPTO14735 213 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 FFAR1O14842 300 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 NDUFB8O95169 186 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 IFNW1P05000 195 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 ACAA1P09110 424 aaPredicted RBP4.47□□□□□ -1.69
CDH13-211ENST00000568770 COX7A1P24310 79 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 CRABP1P29762 137 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 NAA10P41227 235 aaPredicted RBP4.47□□□□□ -1.69
CDH13-211ENST00000568770 CAV3P56539 151 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.47□□□□□ -1.69
CDH13-211ENST00000568770 TRAM2Q15035 370 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 TNFAIP8L3Q5GJ75 292 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 GPR139Q6DWJ6 353 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 DNM1P34Q6PK57 102 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 TBPL2Q6SJ96 375 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 ZNF730Q6ZMV8 503 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 TMPRSS11FQ6ZWK6 438 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 MBOAT2Q6ZWT7 520 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 CENPVQ7Z7K6 275 aaPredicted RBP4.47□□□□□ -1.69
CDH13-211ENST00000568770 ADCK1Q86TW2 530 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 RNF113BQ8IZP6 322 aaKnown RBP4.47□□□□□ -1.69
CDH13-211ENST00000568770 FAM185AQ8N0U4 392 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 DPP10Q8N608 796 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 ZNRF1Q8ND25 227 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 SLC26A10Q8NG04 563 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 OR1M1Q8NGA1 313 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 OR56B2PQ8NGI1 322 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 OR2AJ1Q8NGZ0 328 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 ANGPTL6Q8NI99 470 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 RPS4Y2Q8TD47 263 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 SPTSSAQ969W0 71 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 ZNF799Q96GE5 643 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 MED30Q96HR3 178 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 TPD52L3Q96J77 140 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 RAB3IPQ96QF0 476 aaPredicted RBP4.47□□□□□ -1.69
CDH13-211ENST00000568770 NDEL1Q9GZM8 345 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 PPP1R3EQ9H7J1 279 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 MAP6D1Q9H9H5 199 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 ABCB10Q9NRK6 738 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 C19orf12Q9NSK7 152 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 CYB5R1Q9UHQ9 305 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 PITPNC1Q9UKF7 332 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 B9D1Q9UPM9 204 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 LSM4Q9Y4Z0 139 aaKnown RBP4.47□□□□□ -1.69
CDH13-211ENST00000568770 N6AMT1Q9Y5N5 214 aa4.47□□□□□ -1.69
CDH13-211ENST00000568770 IER3IP1Q9Y5U9 82 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms