RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 SLC15A1P46059 708 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 GRB2P62993 217 aaKnown RBP9.22□□□□□ -0.93
CLK3-222ENST00000568232 GNG3P63215 75 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 SNCBQ16143 134 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 SNAPC1Q16533 368 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 SMIM21Q3B7S5 101 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 IFI44LQ53G44 452 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 C16orf89Q6UX73 402 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 FKBP9P1Q75LS8 142 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 OR2T12Q8NG77 320 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 OR8U1Q8NH10 309 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 PGAM5Q96HS1 289 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 ZNF714Q96N38 554 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 CLEC7AQ9BXN2 247 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 TMEM133Q9H2Q1 129 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 ABCB9Q9NP78 766 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 SESN1Q9Y6P5 492 aa9.22□□□□□ -0.93
CLK3-222ENST00000568232 A0A1W2PRQ8 180 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 TRIM64CA6NLI5 447 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 LINC01548A6NM66 108 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 FAM220BPB1ANY3 271 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 K7N7A8 449 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 GYPBP06028 91 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 DGCR6Q14129 220 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 KIR2DS1Q14954 304 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 CEACAM21Q3KPI0 293 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 ASCC1Q8N9N2 400 aaKnown RBP9.21□□□□□ -0.94
CLK3-222ENST00000568232 POC1AQ8NBT0 407 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 OR52J3Q8NH60 311 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 TSPEARQ8WU66 669 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 DYDC1Q8WWB3 177 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 HSH2DQ96JZ2 352 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 AMELYQ99218 206 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 PAPOLBQ9NRJ5 636 aaKnown RBP9.21□□□□□ -0.94
CLK3-222ENST00000568232 DPM3Q9P2X0 92 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 ENPP4Q9Y6X5 453 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 HECTD4Q9Y4D8 3996 aa9.21□□□□□ -0.94
CLK3-222ENST00000568232 KIAA1109Q2LD37 5005 aa9.2□□□□□ -0.94
CLK3-222ENST00000568232 FAM172BPA6NC97 362 aa9.2□□□□□ -0.94
CLK3-222ENST00000568232 DNAJC8O75937 253 aaPredicted RBP9.2□□□□□ -0.94
CLK3-222ENST00000568232 DIRAS1O95057 198 aa9.2□□□□□ -0.94
CLK3-222ENST00000568232 KRT72Q14CN4 511 aa9.2□□□□□ -0.94
CLK3-222ENST00000568232 CBLL1Q75N03 491 aa9.2□□□□□ -0.94
CLK3-222ENST00000568232 CYP4Z1Q86W10 505 aa9.2□□□□□ -0.94
CLK3-222ENST00000568232 TPRX1Q8N7U7 411 aa9.2□□□□□ -0.94
CLK3-222ENST00000568232 OR2T4Q8NH00 348 aa9.2□□□□□ -0.94
CLK3-222ENST00000568232 RNFT2Q96EX2 444 aa9.2□□□□□ -0.94
CLK3-222ENST00000568232 MOB4Q9Y3A3 225 aa9.2□□□□□ -0.94
CLK3-222ENST00000568232 HSPE1-MOB4S4R3N1 261 aa9.2□□□□□ -0.94
CLK3-222ENST00000568232 M0QZK8 103 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 IDH3BO43837 385 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 NXPH2O95156 264 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 CLUP10909 449 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 SPNP16150 400 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 MYF6P23409 242 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 FMO3P31513 532 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 SLC35B1P78383 322 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 EDDM3AQ14507 147 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 TEX30Q5JUR7 227 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 FAM27D1Q5T7N8 215 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 MOB3CQ70IA8 216 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 GDPD3Q7L5L3 318 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 ABHD12Q8N2K0 398 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 STPG2Q8N412 459 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 COMMD1Q8N668 190 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 FUZQ9BT04 418 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 ABHD6Q9BV23 337 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 RGCCQ9H4X1 137 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 SLC22A13Q9Y226 551 aa9.19□□□□□ -0.94
CLK3-222ENST00000568232 LEUTXA8MZ59 168 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 PRR23D1E9PI22 279 aaPredicted RBP9.18□□□□□ -0.94
CLK3-222ENST00000568232 LDLRAD4O15165 306 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 ZNF737O75373 536 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 SERPINA1P01009 418 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 APOC1P02654 83 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 PRR23D2P0DMB1 279 aaPredicted RBP9.18□□□□□ -0.94
CLK3-222ENST00000568232 CDX1P47902 265 aaPredicted RBP9.18□□□□□ -0.94
CLK3-222ENST00000568232 BDH1Q02338 343 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 TEX38Q6PEX7 206 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 ZBTB49Q6ZSB9 765 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 FAM86B1Q8N7N1 296 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 C5orf56Q8N8D9 126 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 SLC37A3Q8NCC5 494 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 OR5A2Q8NGI9 324 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 RNF133Q8WVZ7 376 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 NRIP2Q9BQI9 281 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 EGLN3Q9H6Z9 239 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 KRCC1Q9NPI7 259 aaPredicted RBP9.18□□□□□ -0.94
CLK3-222ENST00000568232 NDUFAF4Q9P032 175 aa9.18□□□□□ -0.94
CLK3-222ENST00000568232 hADV38S2A0JD32 116 aa9.17□□□□□ -0.94
CLK3-222ENST00000568232 ARRDC5A6NEK1 342 aa9.17□□□□□ -0.94
CLK3-222ENST00000568232 CXCR6O00574 342 aa9.17□□□□□ -0.94
CLK3-222ENST00000568232 MRASO14807 208 aa9.17□□□□□ -0.94
CLK3-222ENST00000568232 NOS1APO75052 506 aaPredicted RBP9.17□□□□□ -0.94
CLK3-222ENST00000568232 IGLV1-47P01700 117 aa9.17□□□□□ -0.94
CLK3-222ENST00000568232 GP9P14770 177 aa9.17□□□□□ -0.94
CLK3-222ENST00000568232 OPRL1P41146 370 aa9.17□□□□□ -0.94
CLK3-222ENST00000568232 HAAOP46952 286 aa9.17□□□□□ -0.94
CLK3-222ENST00000568232 INSL3P51460 131 aa9.17□□□□□ -0.94
CLK3-222ENST00000568232 ARHGDIBP52566 201 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms