RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PISDQ9UG56 409 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 PTBP3O95758 552 aaKnown RBP9.64□□□□□ -0.87
PALB2-206ENST00000568219 FCGR3AP08637 254 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 RND3P61587 244 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 DEFB133Q30KQ1 61 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 RAET1LQ5VY80 246 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 IL22RA2Q969J5 263 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 MISP3Q96FF7 219 aa9.64□□□□□ -0.87
PALB2-206ENST00000568219 IGHV2-70P01814 119 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 TTRP02766 147 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 AGAP20933 346 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 PTGER4P35408 488 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 PCP4P48539 62 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 PMP22Q01453 160 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 MST1LQ2TV78 715 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 ALKBH2Q6NS38 261 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 BTNL8Q6UX41 500 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 REC114Q7Z4M0 266 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 MYPOPQ86VE0 399 aaPredicted RBP9.63□□□□□ -0.87
PALB2-206ENST00000568219 LHX4Q969G2 390 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 OR51B6Q9H340 312 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 CBLN4Q9NTU7 201 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 CBY1Q9Y3M2 126 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 TIMM10BQ9Y5J6 103 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 MDC1Q14676 2089 aaKnown RBP9.63□□□□□ -0.87
PALB2-206ENST00000568219 DOCK9Q9BZ29 2069 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 F8VVB4 439 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 F8VWA3 439 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 PDGFBP01127 241 aaPredicted RBP9.63□□□□□ -0.87
PALB2-206ENST00000568219 SERPINA7P05543 415 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 CCL5P13501 91 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 NOVA1P51513 510 aaKnown RBP9.63□□□□□ -0.87
PALB2-206ENST00000568219 EFNA3P52797 238 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 FAM3AP98173 230 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 ISXQ2M1V0 245 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 C9orf135Q5VTT2 229 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 RNF144BQ7Z419 303 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 UBALD1Q8TB05 177 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 TCTN2Q96GX1 697 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 HIST1H2AAQ96QV6 131 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 DKKL1Q9UK85 242 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 A0A1W2PNV4 684 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 CD300LBA8K4G0 201 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 HSPB2A8KAH6 182 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 MYOGP15173 224 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 GFERP55789 205 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 HSD17B7P56937 341 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 RNF4P78317 190 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 CCL20P78556 96 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 TFF2Q03403 129 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 HSPB2Q16082 182 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 PLAC9Q5JTB6 97 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 TIPARPQ7Z3E1 657 aaKnown RBP9.63□□□□□ -0.87
PALB2-206ENST00000568219 OR2AE1Q8NHA4 323 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 Q8WTZ3 238 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 TMEM18Q96B42 140 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 C14orf144Q96I85 54 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 CUTCQ9NTM9 273 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 OR14J1Q9UGF5 321 aa9.63□□□□□ -0.87
PALB2-206ENST00000568219 PLPP3O14495 311 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 IL2RAP01589 272 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 SEC11BP0C7V7 166 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 SPANXN5Q5MJ07 72 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 TPSD1Q9BZJ3 242 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 KLF15Q9UIH9 416 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 PHF3Q92576 2039 aaKnown RBP9.62□□□□□ -0.87
PALB2-206ENST00000568219 TNS1Q9HBL0 1735 aaKnown RBP9.62□□□□□ -0.87
PALB2-206ENST00000568219 IGHV3-64DA0A0J9YX35 117 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 CTHP32929 405 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 CSNK1A1P48729 337 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 LBX1P52954 281 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 TMEM267Q0VDI3 215 aaPredicted RBP9.62□□□□□ -0.87
PALB2-206ENST00000568219 ZNF154Q13106 437 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 CLN3Q13286 438 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 ZNF658BQ4V348 819 aaPredicted RBP9.62□□□□□ -0.87
PALB2-206ENST00000568219 NCR3LG1Q68D85 454 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 DOK3Q7L591 496 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 ARHGEF39Q8N4T4 335 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 POC1AQ8NBT0 407 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 OR8B12Q8NGG6 310 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 OR52M1Q8NGK5 317 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 SLC39A7Q92504 469 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 ELOVL1Q9BW60 279 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 DEDDO75618 318 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 SEMA4FO95754 770 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 IL33O95760 270 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 CD5P06127 495 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 P2RY1P47900 373 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 CEBPEQ15744 281 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 ZNF684Q5T5D7 378 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 FBXL14Q8N1E6 418 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 IL22RA1Q8N6P7 574 aa9.62□□□□□ -0.87
PALB2-206ENST00000568219 FAM103A1Q9BTL3 118 aaKnown RBP9.62□□□□□ -0.87
PALB2-206ENST00000568219 MTIF3Q9H2K0 278 aaKnown RBP9.62□□□□□ -0.87
PALB2-206ENST00000568219 IGHV3-15A0A0B4J1V0 119 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 ADAM20O43506 726 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 HIST1H2BKO60814 126 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 HIST1H2BJP06899 126 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 HIST1H2BOP23527 126 aa9.61□□□□□ -0.87
PALB2-206ENST00000568219 HIST1H2BBP33778 126 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms