RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ZNF7P17097 686 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 CSNK2A2P19784 350 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 ATP6V1B2P21281 511 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 UQCRC2P22695 453 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SLC2A5P22732 501 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 OR1E1P30953 314 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 GNRHRP30968 328 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 LCN1P31025 176 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 DDOSTP39656 456 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 GABRA4P48169 554 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 ERFP50548 548 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 RAB5CP51148 216 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 RAB9AP51151 201 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 VSX2P58304 361 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 NCALDP61601 193 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 NUTF2P61970 127 aaKnown RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 RPL19P84098 196 aaKnown RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 IRF8Q02556 426 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 UNC119Q13432 240 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 ARL6IP1Q15041 203 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 PTGES3Q15185 160 aaKnown RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 QPRTQ15274 297 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SLC9A3R2Q15599 337 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 OR4D1Q15615 310 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SYPL1Q16563 259 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 IMPG1Q17R60 797 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 EXOC3L2Q2M3D2 409 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 TRMT5Q32P41 509 aaKnown RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 NSUN5P1Q3KNT7 163 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 COX19Q49B96 90 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 C9orf64Q5T6V5 341 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 RESP18Q5W5W9 173 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 UGT2A3Q6UWM9 527 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 CD300LGQ6UXG3 332 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 ZNF836Q6ZNA1 936 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 ACP7Q6ZNF0 438 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 Q6ZPB1 254 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 PRSS41Q7RTY9 318 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SLC26A11Q86WA9 606 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 ECHDC2Q86YB7 292 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 PHF13Q86YI8 300 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 ZDHHC21Q8IVQ6 265 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SELENOHQ8IZQ5 122 aaKnown RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 DAW1Q8N136 415 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 EIF4E3Q8N5X7 224 aaKnown RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 PACRGLQ8N7B6 248 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 HSD17B11Q8NBQ5 300 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 OR4K14Q8NGD5 310 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 OR4D9Q8NGE8 314 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 OR51D1Q8NGF3 324 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 OR52H1Q8NGJ2 320 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 OR4C6Q8NH72 309 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 ITFG1Q8TB96 612 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 DYNC2LI1Q8TCX1 351 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 C16orf78Q8WTQ4 265 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SKA2Q8WVK7 121 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 RNF133Q8WVZ7 376 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 CREB3L1Q96BA8 519 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 PPWD1Q96BP3 646 aaKnown RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 ZHX1-C8orf76Q96EF9 292 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 CERS2Q96G23 380 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 AMDHD1Q96NU7 426 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 NIPSNAP1Q9BPW8 284 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 ECSITQ9BQ95 431 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 TMEM246Q9BRR3 403 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 NAT9Q9BTE0 207 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 CHRDL1Q9BU40 450 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 BEX2Q9BXY8 128 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SLC25A39Q9BZJ4 359 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 UCK2Q9BZX2 261 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SRRQ9GZT4 340 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 RAB1BQ9H0U4 201 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SLC38A1Q9H2H9 487 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 REEP4Q9H6H4 257 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 NIPAL2Q9H841 368 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 NMNAT1Q9HAN9 279 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 UGT1A7Q9HAW7 530 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 UGT1A10Q9HAW8 530 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 UGT1A8Q9HAW9 530 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 ABCB9Q9NP78 766 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SAR1AQ9NR31 198 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SLC2A9Q9NRM0 540 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 AIG1Q9NVV5 245 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 MS4A12Q9NXJ0 267 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 BABAM2Q9NXR7 383 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SPANXCQ9NY87 97 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 CALML5Q9NZT1 146 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 ZNF282Q9UDV7 671 aaPredicted RBP2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SCP2D1Q9UJQ7 156 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 GNG8Q9UK08 70 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 RAB26Q9ULW5 256 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 HSPB11Q9Y547 144 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 OR51B4Q9Y5P0 310 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SAR1BQ9Y6B6 198 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 SIP14410 1827 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 DMXL1Q9Y485 3027 aa2.39□□□□□ -2.03
HERPUD1-212ENST00000567944 MYH1P12882 1939 aa2.38□□□□□ -2.03
HERPUD1-212ENST00000567944 MYH8P13535 1937 aa2.38□□□□□ -2.03
HERPUD1-212ENST00000567944 SCN10AQ9Y5Y9 1956 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms