RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 PKIBQ9C010 78 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 SEBOXQ9HB31 216 aaPredicted RBP12.16□□□□□ -0.46
RNF40-209ENST00000566703 SIGLEC9Q9Y336 463 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 TBL2Q9Y4P3 447 aaKnown RBP12.16□□□□□ -0.46
RNF40-209ENST00000566703 SNX5Q9Y5X3 404 aa12.16□□□□□ -0.46
RNF40-209ENST00000566703 ZNF670-ZNF695F2Z2N8 137 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 CHRM2P08172 466 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 CCL3L1P16619 93 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 CXCR4P61073 352 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 EMX1Q04741 257 aaPredicted RBP12.15□□□□□ -0.46
RNF40-209ENST00000566703 BCL2L15Q5TBC7 163 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 ASRGL1Q7L266 308 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 C1QL4Q86Z23 238 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 SLC35F2Q8IXU6 374 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 Q8N2B8 174 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 KLHDC1Q8N7A1 406 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 CCDC54Q8NEL0 328 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 UTP4Q969X6 686 aaKnown RBP12.15□□□□□ -0.46
RNF40-209ENST00000566703 GPR173Q9NS66 373 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 CLN6Q9NWW5 311 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 SLC7A11Q9UPY5 501 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 POMPQ9Y244 141 aa12.15□□□□□ -0.46
RNF40-209ENST00000566703 CCL1P22362 96 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 BMXP51813 675 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 DLX6P56179 175 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 ZNF273Q14593 569 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 BEAN1Q3B7T3 259 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 KPRPQ5T749 579 aaPredicted RBP12.14□□□□□ -0.47
RNF40-209ENST00000566703 SLX4IPQ5VYV7 408 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 GID4Q8IVV7 300 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 TCEANCQ8N8B7 351 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 OR11H6Q8NGC7 330 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 OR13D1Q8NGV5 346 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 TMEM163Q8TC26 289 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 FOXRED1Q96CU9 486 aaPredicted RBP12.14□□□□□ -0.47
RNF40-209ENST00000566703 ADGRL4Q9HBW9 690 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 MRM2Q9UI43 246 aaKnown RBP12.14□□□□□ -0.47
RNF40-209ENST00000566703 PITPNC1Q9UKF7 332 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 GTF2A1LQ9UNN4 478 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 FOXJ3Q9UPW0 622 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 SLC22A13Q9Y226 551 aa12.14□□□□□ -0.47
RNF40-209ENST00000566703 ZAR1LA6NP61 321 aa12.13□□□□□ -0.47
RNF40-209ENST00000566703 ZNF728P0DKX0 622 aa12.13□□□□□ -0.47
RNF40-209ENST00000566703 COX7A1P24310 79 aa12.13□□□□□ -0.47
RNF40-209ENST00000566703 CEBPDP49716 269 aaPredicted RBP12.13□□□□□ -0.47
RNF40-209ENST00000566703 DYNLT3P51808 116 aa12.13□□□□□ -0.47
RNF40-209ENST00000566703 MEF2CQ06413 473 aaPredicted RBP12.13□□□□□ -0.47
RNF40-209ENST00000566703 FBLN7Q53RD9 439 aa12.13□□□□□ -0.47
RNF40-209ENST00000566703 C12orf73Q69YU5 71 aa12.13□□□□□ -0.47
RNF40-209ENST00000566703 ANGPTL5Q86XS5 388 aa12.13□□□□□ -0.47
RNF40-209ENST00000566703 TTTY10Q9BZA0 68 aa12.13□□□□□ -0.47
RNF40-209ENST00000566703 OR14J1Q9UGF5 321 aa12.13□□□□□ -0.47
RNF40-209ENST00000566703 ENOPH1Q9UHY7 261 aa12.13□□□□□ -0.47
RNF40-209ENST00000566703 TCF19Q9Y242 345 aa12.13□□□□□ -0.47
RNF40-209ENST00000566703 TET2Q6N021 2002 aaPredicted RBP12.12□□□□□ -0.47
RNF40-209ENST00000566703 MEGF11A6BM72 1044 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 ODF3BA8MYP8 253 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 MAGEB4O15481 346 aaPredicted RBP12.12□□□□□ -0.47
RNF40-209ENST00000566703 CHST1O43916 411 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 ZNF737O75373 536 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 DNAJC8O75937 253 aaPredicted RBP12.12□□□□□ -0.47
RNF40-209ENST00000566703 KRT8P05787 483 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 OR2T7P0C7T2 308 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 PAX6P26367 422 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 FUT6P51993 359 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 COL10A1Q03692 680 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 SAMD5Q5TGI4 173 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 ZNF626Q68DY1 528 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 REC114Q7Z4M0 266 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 BCDIN3DQ7Z5W3 292 aaKnown RBP12.12□□□□□ -0.47
RNF40-209ENST00000566703 LHFPL4Q7Z7J7 247 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 RPS4Y2Q8TD47 263 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 SLC7A6OSQ96CW6 309 aaPredicted RBP12.12□□□□□ -0.47
RNF40-209ENST00000566703 C10orf35Q96D05 121 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 SNX22Q96L94 193 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 CEP19Q96LK0 163 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 ABCB10Q9NRK6 738 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 KRT84Q9NSB2 600 aa12.12□□□□□ -0.47
RNF40-209ENST00000566703 WARS2Q9UGM6 360 aaKnown RBP12.12□□□□□ -0.47
RNF40-209ENST00000566703 A6NDX4 124 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 G3V2T6 193 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 G3V4G9 280 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 GATBO75879 557 aaKnown RBP12.11□□□□□ -0.47
RNF40-209ENST00000566703 SULT1C4O75897 302 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 SERPINA3P01011 423 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 ARG1P05089 322 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 VSIG10L2P0DP72 767 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 CNN3Q15417 329 aaKnown RBP12.11□□□□□ -0.47
RNF40-209ENST00000566703 UBE2V2Q15819 145 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 MINOS1Q5TGZ0 78 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 KDM4DQ6B0I6 523 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 CCBE1Q6UXH8 406 aaPredicted RBP12.11□□□□□ -0.47
RNF40-209ENST00000566703 ZNF782Q6ZMW2 699 aaPredicted RBP12.11□□□□□ -0.47
RNF40-209ENST00000566703 GDPD3Q7L5L3 318 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 ENTHD1Q8IYW4 607 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 OR8H2Q8N162 312 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 YIPF7Q8N8F6 280 aa12.11□□□□□ -0.47
RNF40-209ENST00000566703 ASCC1Q8N9N2 400 aaKnown RBP12.11□□□□□ -0.47
RNF40-209ENST00000566703 NKX3-1Q99801 234 aaPredicted RBP12.11□□□□□ -0.47
RNF40-209ENST00000566703 ADI1Q9BV57 179 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms