RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 KIAA1324LA8MWY0 1029 aaPredicted RBP21.77■■□□□ 1.08
NME3-209ENST00000566600 ZNF879B4DU55 563 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 PHF1O43189 567 aaPredicted RBP21.77■■□□□ 1.08
NME3-209ENST00000566600 PLATP00750 562 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 HSMCR30P0CW71 290 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 HNF1AP20823 631 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 MAP2K4P45985 399 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 POU3F4P49335 361 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 ERVK11-1P61568 191 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 MLLT11Q13015 90 aaPredicted RBP21.77■■□□□ 1.08
NME3-209ENST00000566600 PDZK1IP1Q13113 114 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 WDR25Q64LD2 544 aaPredicted RBP21.77■■□□□ 1.08
NME3-209ENST00000566600 ZNF841Q6ZN19 808 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 OR5T2Q8NGG2 359 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 ANGPTL6Q8NI99 470 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 MED30Q96HR3 178 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 ZNF488Q96MN9 340 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 CCL13Q99616 98 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 HES4Q9HCC6 221 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 CTSZQ9UBR2 303 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 CDC42EP3Q9UKI2 254 aa21.77■■□□□ 1.08
NME3-209ENST00000566600 J3QLI3 93 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 GPX5O75715 221 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 TPBGQ13641 420 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 KISS1Q15726 138 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 CR1LQ2VPA4 569 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 C11orf91Q3C1V1 193 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 DCAF12L2Q5VW00 463 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 CD276Q5ZPR3 534 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 ZNF367Q7RTV3 350 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 SLAMF9Q96A28 289 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 OR14A2Q96R54 314 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 MGLLQ99685 303 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 SHARPINQ9H0F6 387 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 TMEM138Q9NPI0 162 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 MTCH1Q9NZJ7 389 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 LRRC42Q9Y546 428 aa21.76■■□□□ 1.07
NME3-209ENST00000566600 SETD2Q9BYW2 2564 aaPredicted RBP21.76■■□□□ 1.07
NME3-209ENST00000566600 SONP18583 2426 aaKnown RBP21.76■■□□□ 1.07
NME3-209ENST00000566600 TRBV5-7A0A0A0MS05 114 aa21.75■■□□□ 1.07
NME3-209ENST00000566600 TRAPPC2LH3BP13 241 aa21.75■■□□□ 1.07
NME3-209ENST00000566600 ALDOBP05062 364 aa21.75■■□□□ 1.07
NME3-209ENST00000566600 FAHD2BQ6P2I3 314 aaPredicted RBP21.75■■□□□ 1.07
NME3-209ENST00000566600 ZNF788Q6ZQV5 615 aa21.75■■□□□ 1.07
NME3-209ENST00000566600 SAXO1Q8IYX7 474 aa21.75■■□□□ 1.07
NME3-209ENST00000566600 FAHD2AQ96GK7 314 aa21.75■■□□□ 1.07
NME3-209ENST00000566600 SPACA5Q96QH8 159 aa21.75■■□□□ 1.07
NME3-209ENST00000566600 ACOT13Q9NPJ3 140 aa21.75■■□□□ 1.07
NME3-209ENST00000566600 DVL1O14640 695 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 GPR37O15354 613 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 NDUFB3O43676 98 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 CRLF1O75462 422 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 PSG2P11465 335 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 FSTP19883 344 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 TGFBR2P37173 567 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 IL13RA1P78552 427 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 TRAM1Q15629 374 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 FAM120AOSQ5T036 256 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 LIPKQ5VXJ0 399 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 ASPHD2Q6ICH7 369 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 FIP1L1Q6UN15 594 aaKnown RBP21.74■■□□□ 1.07
NME3-209ENST00000566600 TEX29Q8N6K0 151 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 ZSCAN4Q8NAM6 433 aaPredicted RBP21.74■■□□□ 1.07
NME3-209ENST00000566600 RFT1Q96AA3 541 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 DERL3Q96Q80 235 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 TMED9Q9BVK6 235 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 BEX2Q9BXY8 128 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 RHOFQ9HBH0 211 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 FOXJ3Q9UPW0 622 aa21.74■■□□□ 1.07
NME3-209ENST00000566600 IGKV1D-17A0A075B6S4 117 aa21.73■■□□□ 1.07
NME3-209ENST00000566600 ECDO95905 644 aaPredicted RBP21.73■■□□□ 1.07
NME3-209ENST00000566600 CPEP16870 476 aa21.73■■□□□ 1.07
NME3-209ENST00000566600 IGFBP3P17936 291 aaPredicted RBP21.73■■□□□ 1.07
NME3-209ENST00000566600 PSMA1P25786 263 aaKnown RBP21.73■■□□□ 1.07
NME3-209ENST00000566600 BDKRB2P30411 391 aa21.73■■□□□ 1.07
NME3-209ENST00000566600 GABRA2P47869 451 aa21.73■■□□□ 1.07
NME3-209ENST00000566600 EMX1Q04741 257 aaPredicted RBP21.73■■□□□ 1.07
NME3-209ENST00000566600 CHRFAM7AQ494W8 412 aa21.73■■□□□ 1.07
NME3-209ENST00000566600 LRRC10Q5BKY1 277 aa21.73■■□□□ 1.07
NME3-209ENST00000566600 OR51A2Q8NGJ7 313 aa21.73■■□□□ 1.07
NME3-209ENST00000566600 GPER1Q99527 375 aa21.73■■□□□ 1.07
NME3-209ENST00000566600 ZNF222Q9UK12 451 aa21.73■■□□□ 1.07
NME3-209ENST00000566600 FN1P02751 2386 aaKnown RBP21.73■■□□□ 1.07
NME3-209ENST00000566600 DOCK11Q5JSL3 2073 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 LOC105371242A0A075B767 164 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 SIGLEC5O15389 551 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 SPRY1O43609 319 aaPredicted RBP21.72■■□□□ 1.07
NME3-209ENST00000566600 KNG1P01042 644 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 AMY2BP19961 511 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 KCTD21Q4G0X4 260 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 ACSM3Q53FZ2 586 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 BTNL3Q6UXE8 466 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 SATL1Q86VE3 508 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 FAM216BQ8N7L0 139 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 RAB40AQ8WXH6 277 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 SDSLQ96GA7 329 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 GAFA1Q96PS6 74 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 INSIG2Q9Y5U4 225 aa21.72■■□□□ 1.07
NME3-209ENST00000566600 RFPL4AA6NLU0 287 aa21.71■■□□□ 1.07
NME3-209ENST00000566600 RFPL4AL1F8VTS6 287 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms