RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 NKPD1Q17RQ9 610 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 ODF4Q2M2E3 257 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 GFOD2Q3B7J2 385 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 FAM76BQ5HYJ3 339 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 OR5AS1Q8N127 324 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 RGP1Q92546 391 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-206ENST00000565990 FAM71F1Q96KD3 344 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-206ENST00000565990 CCL19Q99731 98 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 CACNG6Q9BXT2 260 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 COMMD4Q9H0A8 199 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 PPIL3Q9H2H8 161 aaKnown RBP10.72□□□□□ -0.69
SF3B3-206ENST00000565990 MSL2Q9HCI7 577 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 PIGLQ9Y2B2 252 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 RHBDD3Q9Y3P4 386 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 MPC1Q9Y5U8 109 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 V9GY05 133 aa10.72□□□□□ -0.69
SF3B3-206ENST00000565990 ANKRD17O75179 2603 aaKnown RBP10.72□□□□□ -0.69
SF3B3-206ENST00000565990 MEIKINA0A087WXM9 373 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 A0A0A6YYJ9 748 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 TRBV5-5A0A0J9YX44 114 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 ZNF816-ZNF321PA0A0X1KG74 233 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 LOC107986453A0A1B0GWG9 222 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 IFITM5A6NNB3 132 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 ANKRD30BLA7E2S9 258 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 A8MV72 311 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-206ENST00000565990 MLNRO43193 412 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 LMX1BO60663 402 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 PEX14O75381 377 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 DYSFO75923 2080 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 IL5P05113 134 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 SULT1A3P0DMM9 295 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 SULT1A4P0DMN0 295 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 OR10A3P58181 314 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 PCGF3Q3KNV8 242 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 Q499Y3 187 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 METTL11BQ5VVY1 283 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 DNM1P46Q6ZS02 220 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 CSMD2Q7Z408 3487 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 C9orf62Q8N4C0 152 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 FTMTQ8N4E7 242 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 BHLHE23Q8NDY6 225 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 OR51A4Q8NGJ6 313 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 OR10AC1Q8NH08 325 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 ZNF671Q8TAW3 534 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 GPR148Q8TDV2 347 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 NEU4Q8WWR8 484 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-206ENST00000565990 GTF3AQ92664 365 aaKnown RBP10.71□□□□□ -0.69
SF3B3-206ENST00000565990 DERL3Q96Q80 235 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 GSX2Q9BZM3 304 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 RAB1BQ9H0U4 201 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 BEX4Q9NWD9 120 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-206ENST00000565990 TAS2R8Q9NYW2 309 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 IL19Q9UHD0 177 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 SCP2D1Q9UJQ7 156 aa10.71□□□□□ -0.69
SF3B3-206ENST00000565990 POLQO75417 2590 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 H0YL77 283 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 SPRY3O43610 288 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 PTBP3O95758 552 aaKnown RBP10.7□□□□□ -0.7
SF3B3-206ENST00000565990 CA6P23280 308 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 DNASE1P24855 282 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 FAUP35544 74 aaKnown RBP10.7□□□□□ -0.7
SF3B3-206ENST00000565990 CDKN1AP38936 164 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 CD200P41217 278 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 CAPZA1P52907 286 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 MRPS11P82912 194 aaKnown RBP10.7□□□□□ -0.7
SF3B3-206ENST00000565990 CEACAM21Q3KPI0 293 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 FAM209AQ5JX71 171 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 ZNF529Q6P280 563 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 COMMD2Q86X83 199 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 LRRC75A-AS1Q8N1F1 130 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 SPICQ8N5J4 248 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 SPERTQ8NA61 448 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 OR2Z1Q8NG97 314 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 OR5P3Q8WZ94 311 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 FGGYQ96C11 551 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 S100A16Q96FQ6 103 aaKnown RBP10.7□□□□□ -0.7
SF3B3-206ENST00000565990 VRK1Q99986 396 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-206ENST00000565990 DYNLRB1Q9NP97 96 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 NUDT15Q9NV35 164 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 PLEKHA6Q9Y2H5 1048 aa10.7□□□□□ -0.7
SF3B3-206ENST00000565990 NOP16Q9Y3C1 178 aaKnown RBP10.7□□□□□ -0.7
SF3B3-206ENST00000565990 USF3Q68DE3 2245 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 TANC2Q9HCD6 1990 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 TRBV5-7A0A0A0MS05 114 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 LOC100289279A0A1B0GTE1 492 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 LINC00862A6NCI5 91 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 ZNF850A8MQ14 1090 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 SNRPGP15A8MWD9 76 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 LANCL1O43813 399 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 NRASP01111 189 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 FAHP16930 419 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 GDNFP39905 211 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 MAGEB1P43366 347 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 GATA4P43694 442 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 EFNA4P52798 201 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 DHODHQ02127 395 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 PRDX4Q13162 271 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 FCN2Q15485 313 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 DEFB113Q30KQ7 82 aa10.69□□□□□ -0.7
SF3B3-206ENST00000565990 Q5BKY6 102 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms