RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 SPSB1Q96BD6 273 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 TBX15Q96SF7 602 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 FGF20Q9NP95 211 aaPredicted RBP16.4■□□□□ 0.22
CMTM3-211ENST00000565922 ONECUT1Q9UBC0 465 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 HSPE1-MOB4S4R3N1 261 aa16.4■□□□□ 0.22
CMTM3-211ENST00000565922 TRBV23-1A0A0A0MS06 115 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 RFPL4AA6NLU0 287 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 OR4C45A6NMZ5 311 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 RFPL4AL1F8VTS6 287 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 CASQ2O14958 399 aaPredicted RBP16.39■□□□□ 0.21
CMTM3-211ENST00000565922 SELLP14151 372 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 ATP1B3P54709 279 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 UBA52P62987 128 aaKnown RBP16.39■□□□□ 0.21
CMTM3-211ENST00000565922 GABPB1Q06547 395 aaPredicted RBP16.39■□□□□ 0.21
CMTM3-211ENST00000565922 BAMBIQ13145 260 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 LHFPL2Q6ZUX7 228 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 Q8IYB0 196 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 FGGYQ96C11 551 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 ADAT3Q96EY9 351 aaPredicted RBP16.39■□□□□ 0.21
CMTM3-211ENST00000565922 ZNF488Q96MN9 340 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 DCLRE1BQ9H816 532 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 HES4Q9HCC6 221 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 MAB21L2Q9Y586 359 aa16.39■□□□□ 0.21
CMTM3-211ENST00000565922 A0A1W2PQ09 198 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 H0YAE9 185 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 KNG1P01042 644 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 MYL12AP19105 171 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 PRTN3P24158 256 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 CAPZA1P52907 286 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 BLMHQ13867 455 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 OGFRL1Q5TC84 451 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-211ENST00000565922 FIP1L1Q6UN15 594 aaKnown RBP16.38■□□□□ 0.21
CMTM3-211ENST00000565922 BRD3OSQ6XYD6 125 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 TMPRSS11AQ6ZMR5 421 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 ANGPTL5Q86XS5 388 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 FGFRL1Q8N441 504 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 ZNRF1Q8ND25 227 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 CNIH3Q8TBE1 160 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 CEP19Q96LK0 163 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 ZNF48Q96MX3 618 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-211ENST00000565922 ZNF649Q9BS31 505 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 ISG20L2Q9H9L3 353 aaKnown RBP16.38■□□□□ 0.21
CMTM3-211ENST00000565922 ESM1Q9NQ30 184 aa16.38■□□□□ 0.21
CMTM3-211ENST00000565922 CENPVL3A0A0U1RRI6 287 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 A0A1W2PPH5 198 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 DNAJC9-AS1A6NH13 148 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 CLIC3O95833 236 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 ATF1P18846 271 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 AZGP1P25311 298 aaKnown RBP16.37■□□□□ 0.21
CMTM3-211ENST00000565922 PRDX2P32119 198 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 ERVK11-1P61568 191 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 ADARB1P78563 741 aaKnown RBP16.37■□□□□ 0.21
CMTM3-211ENST00000565922 GUCA2AQ02747 115 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 SMN1Q16637 294 aaKnown RBP16.37■□□□□ 0.21
CMTM3-211ENST00000565922 METAP1DQ6UB28 335 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-211ENST00000565922 VMO1Q7Z5L0 202 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 MKXQ8IYA7 352 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 OR5AK2Q8NH90 309 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 LHX4Q969G2 390 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 ZDHHC16Q969W1 377 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 SLC25A28Q96A46 364 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 OPALINQ96PE5 141 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 FAM234AQ9H0X4 552 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 CHCHD3Q9NX63 227 aaKnown RBP16.37■□□□□ 0.21
CMTM3-211ENST00000565922 CAB39Q9Y376 341 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-211ENST00000565922 EXOSC1Q9Y3B2 195 aaKnown RBP16.37■□□□□ 0.21
CMTM3-211ENST00000565922 DNHD1Q96M86 4753 aa16.37■□□□□ 0.21
CMTM3-211ENST00000565922 DSCAML1Q8TD84 2053 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 IGKV1-27A0A075B6S5 117 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 IGHV1-69DA0A0B4J2H0 117 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 TRBV2A0A0J9YWF9 115 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 ANKRD65E5RJM6 399 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 CLDN34H7C241 214 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 M0R1W7 72 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 IGHV1-69P01742 117 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 LIMS3P0CW19 117 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 LIMS4P0CW20 117 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 CAPGP40121 348 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 MTCP1P56278 107 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 CCDC58Q4VC31 144 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 C1orf122Q6ZSJ8 110 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 SLC25A26Q70HW3 274 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 C8orf59Q8N0T1 100 aaPredicted RBP16.36■□□□□ 0.21
CMTM3-211ENST00000565922 TBC1D15Q8TC07 691 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 GCDHQ92947 438 aaPredicted RBP16.36■□□□□ 0.21
CMTM3-211ENST00000565922 NOX4Q9NPH5 578 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 OR14J1Q9UGF5 321 aa16.36■□□□□ 0.21
CMTM3-211ENST00000565922 ZFPL1O95159 310 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 MT-ND2P03891 347 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 TFF1P04155 84 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 NCR3LG1Q68D85 454 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 C12orf54Q6X4T0 127 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 SERPINA12Q8IW75 414 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 CD177Q8N6Q3 437 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 OR51A4Q8NGJ6 313 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 OR5D14Q8NGL3 314 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 TSEN15Q8WW01 171 aaKnown RBP16.35■□□□□ 0.21
CMTM3-211ENST00000565922 SLAMF9Q96A28 289 aa16.35■□□□□ 0.21
CMTM3-211ENST00000565922 CPNE2Q96FN4 548 aaPredicted RBP16.35■□□□□ 0.21
CMTM3-211ENST00000565922 PRDM13Q9H4Q3 707 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms