RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 OCLNQ16625 522 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 ODF4Q2M2E3 257 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 TMEM200BQ69YZ2 307 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 MKXQ8IYA7 352 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 BATF2Q8N1L9 274 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 PRSS35Q8N3Z0 413 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 BEND2Q8NDZ0 799 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 OR10H4Q8NGA5 316 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 OR5D13Q8NGL4 314 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 RBM4BQ9BQ04 359 aaKnown RBP12.77□□□□□ -0.37
CDH3-204ENST00000565453 SF3B6Q9Y3B4 125 aaKnown RBP12.77□□□□□ -0.37
CDH3-204ENST00000565453 PKD1L1Q8TDX9 2849 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 IGKV1-27A0A075B6S5 117 aa12.76□□□□□ -0.37
CDH3-204ENST00000565453 SLC1A7O00341 560 aa12.76□□□□□ -0.37
CDH3-204ENST00000565453 SYT7O43581 403 aa12.76□□□□□ -0.37
CDH3-204ENST00000565453 TSPAN9O75954 239 aa12.76□□□□□ -0.37
CDH3-204ENST00000565453 PAHP00439 452 aa12.76□□□□□ -0.37
CDH3-204ENST00000565453 KIR3DL2P43630 455 aa12.76□□□□□ -0.37
CDH3-204ENST00000565453 RPL31P62899 125 aaKnown RBP12.76□□□□□ -0.37
CDH3-204ENST00000565453 MIDNQ504T8 468 aa12.76□□□□□ -0.37
CDH3-204ENST00000565453 BRICD5Q6PL45 260 aa12.76□□□□□ -0.37
CDH3-204ENST00000565453 OR4M1Q8NGD0 313 aa12.76□□□□□ -0.37
CDH3-204ENST00000565453 OR5R1Q8NH85 324 aa12.76□□□□□ -0.37
CDH3-204ENST00000565453 TRMT10AQ8TBZ6 339 aaKnown RBP12.76□□□□□ -0.37
CDH3-204ENST00000565453 UBE2FQ969M7 185 aa12.76□□□□□ -0.37
CDH3-204ENST00000565453 MEGF8Q7Z7M0 2845 aa12.76□□□□□ -0.37
CDH3-204ENST00000565453 BTBD17A6NE02 478 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 F8VVB4 439 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 F8VWA3 439 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 H3BSH0 61 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 ANGPTL7O43827 346 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 CIB2O75838 187 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 TK1P04183 234 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 CCL3L1P16619 93 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 ZNF273Q14593 569 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 DHRS7BQ6IAN0 325 aaPredicted RBP12.75□□□□□ -0.37
CDH3-204ENST00000565453 CCDC54Q8NEL0 328 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 PYDC1Q8WXC3 89 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 RFKQ969G6 155 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 CHST5Q9GZS9 411 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 FAM234AQ9H0X4 552 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 MEGF9Q9H1U4 602 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 USE1Q9NZ43 259 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 MTCH1Q9NZJ7 389 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 OR14J1Q9UGF5 321 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDH3-204ENST00000565453 SLC7A11Q9UPY5 501 aa12.75□□□□□ -0.37
CDH3-204ENST00000565453 FAM230AA0A1W2PPH8 454 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 H3BNX3 289 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 J3QRE1 110 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 K7N7A8 449 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 ZNF737O75373 536 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 ALPLP05186 524 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 TGFBR2P37173 567 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 DLX6P56179 175 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 ERVFRD-1P60508 538 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 CDC42P60953 191 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 COL10A1Q03692 680 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 TP53I3Q53FA7 332 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 ASPHD2Q6ICH7 369 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 TRUB1Q8WWH5 349 aaKnown RBP12.74□□□□□ -0.37
CDH3-204ENST00000565453 C10orf35Q96D05 121 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 HRASLS5Q96KN8 279 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 PLEKHA1Q9HB21 404 aa12.74□□□□□ -0.37
CDH3-204ENST00000565453 CMYA5Q8N3K9 4069 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 LOC107986453A0A1B0GWG9 222 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 A0A1W2PPH5 198 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 H3BUX3 64 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 ENTPD6O75354 484 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 GATBO75879 557 aaKnown RBP12.73□□□□□ -0.37
CDH3-204ENST00000565453 UBCP0CG48 685 aaKnown RBP12.73□□□□□ -0.37
CDH3-204ENST00000565453 PAX6P26367 422 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 ATP6V1E1P36543 226 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 FUT6P51993 359 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 SLC25A30Q5SVS4 291 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 CRIP3Q6Q6R5 217 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 RDH10Q8IZV5 341 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 CEP19Q96LK0 163 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 SSX3Q99909 188 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 HEXA-AS1Q9H8Q6 139 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 GNG8Q9UK08 70 aa12.73□□□□□ -0.37
CDH3-204ENST00000565453 IGKV1-9A0A0C4DH69 117 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 MEGF11A6BM72 1044 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 C17orf98A8MV24 154 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 EI24O14681 340 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 TIMM23O14925 209 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 CHRM2P08172 466 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 BMXP51813 675 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 SNRPGP62308 76 aaKnown RBP12.72□□□□□ -0.37
CDH3-204ENST00000565453 AANATQ16613 207 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 LRRC75BQ2VPJ9 315 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 SLC35E4Q6ICL7 350 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 FDX2Q6P4F2 183 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 FAM220AQ7Z4H9 259 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 OR2G2Q8NGZ5 317 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 PP6455Q8WZ26 134 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 SLAMF9Q96A28 289 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 RNFT2Q96EX2 444 aa12.72□□□□□ -0.37
CDH3-204ENST00000565453 ADAT3Q96EY9 351 aaPredicted RBP12.72□□□□□ -0.37
CDH3-204ENST00000565453 BORCS8Q96FH0 119 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms