RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 SLC22A6Q4U2R8 563 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 AKR1C8PQ5T2L2 129 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 FAM69BQ5VUD6 431 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 OR2T2Q6IF00 324 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 SLC18B1Q6NT16 456 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 LHFPL1Q86WI0 220 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 C9orf40Q8IXQ3 194 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 AMELYQ99218 206 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 OR11A1Q9GZK7 315 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 GRHPRQ9UBQ7 328 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 HHLA2Q9UM44 414 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 SLC22A13Q9Y226 551 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 PUS1Q9Y606 427 aaKnown RBP eCLIP9.73□□□□□ -0.85
TCF4-222ENST00000564228 IGKV1D-42A0A075B6H8 117 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 DCDC2BA2VCK2 349 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 C9orf172C9J069 976 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 OR13C7P0DN81 318 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 PNMTP11086 282 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 RPS2P15880 293 aaKnown RBP9.72□□□□□ -0.85
TCF4-222ENST00000564228 HSD11B1P28845 292 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 ZNF117Q03924 483 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 EIF3IQ13347 325 aaKnown RBP9.72□□□□□ -0.85
TCF4-222ENST00000564228 GGNBP1Q5YKI7 109 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 KCTD18Q6PI47 426 aaPredicted RBP9.72□□□□□ -0.85
TCF4-222ENST00000564228 LRRC69Q6ZNQ3 347 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 NUP54Q7Z3B4 507 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 ZNF440Q8IYI8 595 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 HSD17B11Q8NBQ5 300 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 OR4D6Q8NGJ1 314 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 OR51A2Q8NGJ7 313 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 PTPMT1Q8WUK0 201 aaPredicted RBP9.72□□□□□ -0.85
TCF4-222ENST00000564228 RAB39BQ96DA2 213 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 KTI12Q96EK9 354 aaPredicted RBP9.72□□□□□ -0.85
TCF4-222ENST00000564228 HIST1H2BLQ99880 126 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 ZPBPQ9BS86 351 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 RTBDNQ9BSG5 229 aaPredicted RBP9.72□□□□□ -0.85
TCF4-222ENST00000564228 LMF2Q9BU23 707 aaKnown RBP9.72□□□□□ -0.85
TCF4-222ENST00000564228 DDA1Q9BW61 102 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 SUCNR1Q9BXA5 334 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 OR8D2Q9GZM6 311 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 C1orf123Q9NWV4 160 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 PITPNC1Q9UKF7 332 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 FBXO7Q9Y3I1 522 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 MPDZO75970 2070 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 IGHV3-20A0A0C4DH32 117 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 VSTM2BA6NLU5 285 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 B4DEV8 164 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 H3BQ15 152 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 ONECUT2O95948 504 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 PNPP00491 289 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 MBP02144 154 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 CHRM2P08172 466 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 ASAH2BP0C7U1 165 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 GABRR1P24046 479 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 TAGLN2P37802 199 aaKnown RBP9.72□□□□□ -0.85
TCF4-222ENST00000564228 GLIPR1P48060 266 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 EMP2P54851 167 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 UBE2KP61086 200 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 UNC119Q13432 240 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 GFI1BQ5VTD9 330 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 MRPL14Q6P1L8 145 aaKnown RBP9.72□□□□□ -0.85
TCF4-222ENST00000564228 OR13C3Q8NGS6 347 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 MFSD8Q8NHS3 518 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 SLC25A43Q8WUT9 341 aaPredicted RBP9.72□□□□□ -0.85
TCF4-222ENST00000564228 TSPAN32Q96QS1 320 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 NKX3-1Q99801 234 aaPredicted RBP9.72□□□□□ -0.85
TCF4-222ENST00000564228 OR10A5Q9H207 317 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 FOXJ2Q9P0K8 574 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 GSKIPQ9P0R6 139 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 HS3ST3B1Q9Y662 390 aa9.72□□□□□ -0.85
TCF4-222ENST00000564228 MASP2O00187 686 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 RAMP1O60894 148 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 TNFSF15O95150 251 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 TRGC1P0CF51 173 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 CEACAM1P13688 526 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 MFGE8Q08431 387 aaPredicted RBP9.71□□□□□ -0.86
TCF4-222ENST00000564228 SPOCK1Q08629 439 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 FUT7Q11130 342 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 GAGE1Q13065 139 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 SLC10A1Q14973 349 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 NNATQ16517 81 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 IAH1Q2TAA2 248 aaPredicted RBP9.71□□□□□ -0.86
TCF4-222ENST00000564228 GPR157Q5UAW9 335 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 C6orf15Q6UXA7 325 aaPredicted RBP9.71□□□□□ -0.86
TCF4-222ENST00000564228 SLC35E3Q7Z769 313 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 MRPL52Q86TS9 123 aaKnown RBP9.71□□□□□ -0.86
TCF4-222ENST00000564228 ZNF321PQ8N8H1 164 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 PLPP5Q8NEB5 264 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 OR13C9Q8NGT0 318 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 C16orf52Q8NHV5 167 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 DAZLQ92904 295 aaKnown RBP9.71□□□□□ -0.86
TCF4-222ENST00000564228 EMG1Q92979 244 aaKnown RBP9.71□□□□□ -0.86
TCF4-222ENST00000564228 NKD1Q969G9 470 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 CMBLQ96DG6 245 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 TVP23CQ96ET8 276 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 MMP25Q9NPA2 562 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 OSGIN2Q9Y236 505 aa9.71□□□□□ -0.86
TCF4-222ENST00000564228 E5RGE8 158 aa9.7□□□□□ -0.86
TCF4-222ENST00000564228 K7N7A8 449 aa9.7□□□□□ -0.86
TCF4-222ENST00000564228 CYB5BO43169 146 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms