RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ZNF442Q9H7R0 627 aa3.81□□□□□ -1.8
SMG1-206ENST00000562668 CCNB1IP1Q9NPC3 277 aa3.81□□□□□ -1.8
SMG1-206ENST00000562668 C8orf4Q9NR00 106 aa3.81□□□□□ -1.8
SMG1-206ENST00000562668 CA10Q9NS85 328 aa3.81□□□□□ -1.8
SMG1-206ENST00000562668 ZNF701Q9NV72 531 aaPredicted RBP3.81□□□□□ -1.8
SMG1-206ENST00000562668 DNAJC27Q9NZQ0 273 aa3.81□□□□□ -1.8
SMG1-206ENST00000562668 ZNF319Q9P2F9 582 aa3.81□□□□□ -1.8
SMG1-206ENST00000562668 MYEF2Q9P2K5 600 aaKnown RBP3.81□□□□□ -1.8
SMG1-206ENST00000562668 EXOGQ9Y2C4 368 aaKnown RBP3.81□□□□□ -1.8
SMG1-206ENST00000562668 CHD3Q12873 2000 aaKnown RBP3.81□□□□□ -1.8
SMG1-206ENST00000562668 OTOGQ6ZRI0 2925 aa3.81□□□□□ -1.8
SMG1-206ENST00000562668 RTTNQ86VV8 2226 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 ARFGEF3Q5TH69 2177 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 DSCAMO60469 2012 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 A0A1B0GWJ7 208 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 C5orf49A4QMS7 147 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 H0YAE9 185 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 CLPTM1O96005 669 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 IGLV3-1P01715 115 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 RAF1P04049 648 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 MRPL3P09001 348 aaKnown RBP3.8□□□□□ -1.8
SMG1-206ENST00000562668 SPARCP09486 303 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 ZNF823P16415 610 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 PAICSP22234 425 aaKnown RBP3.8□□□□□ -1.8
SMG1-206ENST00000562668 MPV17P39210 176 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 CAPGP40121 348 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 NAA10P41227 235 aaPredicted RBP3.8□□□□□ -1.8
SMG1-206ENST00000562668 HTR5AP47898 357 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 EVX1P49640 407 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 GDI2P50395 445 aaKnown RBP3.8□□□□□ -1.8
SMG1-206ENST00000562668 CDH11P55287 796 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 CDC42P60953 191 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 ZNF85Q03923 595 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 SNTB2Q13425 540 aaKnown RBP3.8□□□□□ -1.8
SMG1-206ENST00000562668 TMED1Q13445 227 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 TNK1Q13470 666 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 IL18R1Q13478 541 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 EIF2B1Q14232 305 aaKnown RBP3.8□□□□□ -1.8
SMG1-206ENST00000562668 TBC1D28Q2M2D7 210 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 ALKBH6Q3KRA9 238 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 KLHL12Q53G59 568 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 MEDAGQ5VYS4 303 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 KRT80Q6KB66 452 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 ZNF544Q6NX49 715 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 KRT74Q7RTS7 529 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 ERI1Q8IV48 349 aaKnown RBP3.8□□□□□ -1.8
SMG1-206ENST00000562668 GID4Q8IVV7 300 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 OR6K6Q8NGW6 343 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 OR6N2Q8NGY6 317 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 CNIH3Q8TBE1 160 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 SLC25A40Q8TBP6 338 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 MRPL24Q96A35 216 aaKnown RBP3.8□□□□□ -1.8
SMG1-206ENST00000562668 SLAMF6Q96DU3 332 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 C4orf45Q96LM5 186 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 ATF6BQ99941 703 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 RHNO1Q9BSD3 238 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 PRRG3Q9BZD7 231 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 YIPF3Q9GZM5 350 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 PLK3Q9H4B4 646 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 RNF121Q9H920 327 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 CBLN4Q9NTU7 201 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 FKBP14Q9NWM8 211 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 SLCO1C1Q9NYB5 712 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 PLEK2Q9NYT0 353 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 WARS2Q9UGM6 360 aaKnown RBP3.8□□□□□ -1.8
SMG1-206ENST00000562668 STARD10Q9Y365 291 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 GMPPBQ9Y5P6 360 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 PRRC2AP48634 2157 aaKnown RBP3.8□□□□□ -1.8
SMG1-206ENST00000562668 ANKRD17O75179 2603 aaKnown RBP3.8□□□□□ -1.8
SMG1-206ENST00000562668 TANC2Q9HCD6 1990 aa3.8□□□□□ -1.8
SMG1-206ENST00000562668 TEX15Q9BXT5 2789 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 IQCMA0A1B0GVH7 501 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 A0A1W2PQL4 384 aaPredicted RBP3.79□□□□□ -1.8
SMG1-206ENST00000562668 ZNF878C9JN71 531 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 H7C417 338 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 M0R135 149 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 MAGEB4O15481 346 aaPredicted RBP3.79□□□□□ -1.8
SMG1-206ENST00000562668 MPZL2O60487 215 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 CIDEAO60543 219 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 TMCC2O75069 709 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 PNPP00491 289 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 PTHP01270 115 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 IGHV3-13P01766 116 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 LYNP07948 512 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 OR4A8P0C604 315 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 LIMS3P0CW19 117 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 LIMS4P0CW20 117 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 DBTP11182 482 aaKnown RBP3.79□□□□□ -1.8
SMG1-206ENST00000562668 KITLGP21583 273 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 APLNRP35414 380 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 FABP6P51161 128 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 MMP15P51511 669 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 MFGE8Q08431 387 aaPredicted RBP3.79□□□□□ -1.8
SMG1-206ENST00000562668 ECH1Q13011 328 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 PSG7Q13046 419 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 DEFB113Q30KQ7 82 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 SNAI3Q3KNW1 292 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 SPRNQ5BIV9 151 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 C6orf52Q5T4I8 152 aa3.79□□□□□ -1.8
SMG1-206ENST00000562668 LCN1P1Q5VSP4 162 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms