RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 GABARAPL2P60520 117 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 C11orf91Q3C1V1 193 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 Q499Y3 187 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 ASPHD2Q6ICH7 369 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 FAHD2BQ6P2I3 314 aaPredicted RBP13.9□□□□□ -0.18
CLK3-207ENST00000562389 ZNF788Q6ZQV5 615 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 OR5T2Q8NGG2 359 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 DACT3Q96B18 629 aaPredicted RBP13.9□□□□□ -0.18
CLK3-207ENST00000562389 FAHD2AQ96GK7 314 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 CCL13Q99616 98 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 TMPRSS13Q9BYE2 586 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 CCDC90BQ9GZT6 254 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 SMURF1Q9HCE7 757 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 MMP26Q9NRE1 261 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 TAS2R4Q9NYW5 299 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 ZNF222Q9UK12 451 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 INSIG2Q9Y5U4 225 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 WNK2Q9Y3S1 2297 aa13.9□□□□□ -0.18
CLK3-207ENST00000562389 IGKV1D-17A0A075B6S4 117 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 IGHV2-70DA0A0C4DH43 119 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 A0A1B0GW55 424 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 DVL1O14640 695 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 FCN3O75636 299 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 NXPH2O95156 264 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 PLATP00750 562 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 DUX4L2P0CJ85 424 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 DUX4L3P0CJ86 424 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 DUX4L4P0CJ87 422 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 DUX4L5P0CJ88 424 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 DUX4L6P0CJ89 424 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 DUX4L7P0CJ90 424 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 PSG2P11465 335 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 RAB3AP20336 220 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 POU3F4P49335 361 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 MED22Q15528 200 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 CRIP3Q6Q6R5 217 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 DUX4L9Q6RFH8 374 aaPredicted RBP13.89□□□□□ -0.19
CLK3-207ENST00000562389 IL17RELQ6ZVW7 336 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 SLC25A26Q70HW3 274 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 MKXQ8IYA7 352 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 FAM216BQ8N7L0 139 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 RAB40AQ8WXH6 277 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 SLAMF9Q96A28 289 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 CEP19Q96LK0 163 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 GAFA1Q96PS6 74 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 MTCH1Q9NZJ7 389 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 DUX4Q9UBX2 424 aa13.89□□□□□ -0.19
CLK3-207ENST00000562389 LOC105371242A0A075B767 164 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 SIGLEC5O15389 551 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 MRPS14O60783 128 aaKnown RBP13.88□□□□□ -0.19
CLK3-207ENST00000562389 CYB5AP00167 134 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 HCKP08631 526 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 FSTP19883 344 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 EEF1B2P24534 225 aaKnown RBP13.88□□□□□ -0.19
CLK3-207ENST00000562389 IL13RA1P78552 427 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 PDZK1IP1Q13113 114 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 GPR50Q13585 617 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 TBCEQ15813 527 aaPredicted RBP13.88□□□□□ -0.19
CLK3-207ENST00000562389 CD276Q5ZPR3 534 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 BTNL3Q6UXE8 466 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 Q8IYB0 196 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 TEX29Q8N6K0 151 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 OR51A2Q8NGJ7 313 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 THRSPQ92748 146 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 CPNE2Q96FN4 548 aaPredicted RBP13.88□□□□□ -0.19
CLK3-207ENST00000562389 POM121Q96HA1 1249 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 MED30Q96HR3 178 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 SPACA5Q96QH8 159 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 YTHDF1Q9BYJ9 559 aaKnown RBP13.88□□□□□ -0.19
CLK3-207ENST00000562389 ISYNA1Q9NPH2 558 aa13.88□□□□□ -0.19
CLK3-207ENST00000562389 TRBV5-7A0A0A0MS05 114 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 ZNF879B4DU55 563 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 C22orf46C9J442 243 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 GPR37O15354 613 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 MAGEB3O15480 346 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 SPRY1O43609 319 aaPredicted RBP13.87□□□□□ -0.19
CLK3-207ENST00000562389 NDUFB3O43676 98 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 ENSAO43768 121 aaKnown RBP13.87□□□□□ -0.19
CLK3-207ENST00000562389 GPX5O75715 221 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 ECDO95905 644 aaPredicted RBP13.87□□□□□ -0.19
CLK3-207ENST00000562389 KNG1P01042 644 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 AVPP01185 164 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 FAM157CP0CG43 387 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 IGFBP3P17936 291 aaPredicted RBP13.87□□□□□ -0.19
CLK3-207ENST00000562389 SRD5A1P18405 259 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 GABRA2P47869 451 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 PPP3R1P63098 170 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 PAX8Q06710 450 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 KISS1Q15726 138 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 LRRC10Q5BKY1 277 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 C1orf229Q6ZS94 237 aaPredicted RBP13.87□□□□□ -0.19
CLK3-207ENST00000562389 RNF144BQ7Z419 303 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 SAXO1Q8IYX7 474 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 BATF2Q8N1L9 274 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 ST8SIA4Q92187 359 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 UFD1Q92890 307 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 RFT1Q96AA3 541 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 SDSLQ96GA7 329 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 OR14A2Q96R54 314 aa13.87□□□□□ -0.19
CLK3-207ENST00000562389 NUDT16L1Q9BRJ7 211 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms