RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 FDCSPQ8NFU4 85 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 OR1K1Q8NGR3 316 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 OR51F2Q8NH61 342 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 CITED4Q96RK1 184 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 RTBDNQ9BSG5 229 aaPredicted RBP8.47□□□□□ -1.05
SMG1-205ENST00000561947 PAPOLGQ9BWT3 736 aaKnown RBP8.47□□□□□ -1.05
SMG1-205ENST00000561947 MFFQ9GZY8 342 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 ARL6Q9H0F7 186 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 PCDHB16Q9NRJ7 776 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 COMMD9Q9P000 198 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 ZNF581Q9P0T4 197 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 EDARQ9UNE0 448 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 POM121CA8CG34 1229 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 SFT2D2O95562 160 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 SFTPBP07988 381 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 WT1P19544 449 aaPredicted RBP8.47□□□□□ -1.05
SMG1-205ENST00000561947 DTYMKP23919 212 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 PRDX4Q13162 271 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 SURF2Q15527 256 aaPredicted RBP8.47□□□□□ -1.05
SMG1-205ENST00000561947 FBXW9Q5XUX1 488 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 NSUN5P2Q63ZY6 315 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 TMEM65Q6PI78 240 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 IGF2-ASQ6U949 168 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 CALHM1Q8IU99 346 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 FBXL14Q8N1E6 418 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 ZNF611Q8N823 705 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 OR10AD1Q8NGE0 317 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 BCL2L2Q92843 193 aaPredicted RBP8.47□□□□□ -1.05
SMG1-205ENST00000561947 SEC22AQ96IW7 307 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 SULT4A1Q9BR01 284 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 ST3GAL6Q9Y274 331 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 AUP1Q9Y679 476 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 MED12LQ86YW9 2145 aa8.46□□□□□ -1.05
SMG1-205ENST00000561947 PQLC2LA1A4F0 135 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 FAM25EA8MYX2 175 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 LEUTXA8MZ59 168 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 CST4P01036 141 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 IGHG3P01860 377 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 SLC25A4P12235 298 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 ARPC4P59998 168 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 BAMBIQ13145 260 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 HIKESHIQ53FT3 197 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 IGFL2Q6UWQ7 119 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 CMSS1Q9BQ75 279 aaKnown RBP8.46□□□□□ -1.06
SMG1-205ENST00000561947 CRIM1Q9NZV1 1036 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 STARD10Q9Y365 291 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 A0A0B4J2A0 478 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 TUBAL3A6NHL2 446 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 NGFP01138 241 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 PI3P19957 117 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 APLNRP35414 380 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 RBM11P57052 281 aaKnown RBP8.46□□□□□ -1.06
SMG1-205ENST00000561947 RAB14P61106 215 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 NHLRC3Q5JS37 347 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 C11orf87Q6NUJ2 197 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 CLEC18BQ6UXF7 455 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 GSG1LQ6UXU4 331 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 SLC25A26Q70HW3 274 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 P4HA3Q7Z4N8 544 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 ZNF546Q86UE3 836 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 ZDHHC23Q8IYP9 409 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 PPP1R1CQ8WVI7 109 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 HPSE2Q8WWQ2 592 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 NANOS1Q8WY41 292 aaKnown RBP8.46□□□□□ -1.06
SMG1-205ENST00000561947 GMPPAQ96IJ6 420 aaPredicted RBP8.46□□□□□ -1.06
SMG1-205ENST00000561947 FGF23Q9GZV9 251 aaPredicted RBP8.46□□□□□ -1.06
SMG1-205ENST00000561947 OPA3Q9H6K4 179 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 SHPKQ9UHJ6 478 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 ANXA10Q9UJ72 324 aa8.46□□□□□ -1.06
SMG1-205ENST00000561947 PDCD6O75340 191 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 B3GALNT1O75752 331 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 FCGR3AP08637 254 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 ECI1P42126 302 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 SUPT4H1P63272 117 aaKnown RBP8.45□□□□□ -1.06
SMG1-205ENST00000561947 CLN3Q13286 438 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 ESCO2Q56NI9 601 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 Q8NFD4 153 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 WBP1Q96G27 269 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 GSX2Q9BZM3 304 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 PGAM2P15259 253 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 GLRA1P23415 457 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 SERPINF1P36955 418 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 TCF15Q12870 199 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 SLC9A3R2Q15599 337 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 CEACAM21Q3KPI0 293 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 LRRC37A5PQ49AS3 106 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 MDP1Q86V88 176 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 SAXO1Q8IYX7 474 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 OR6K3Q8NGY3 331 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 COQ8AQ8NI60 647 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 PCNPQ8WW12 178 aaKnown RBP8.45□□□□□ -1.06
SMG1-205ENST00000561947 DYRK2Q92630 601 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 ZNF2Q9BSG1 426 aaPredicted RBP8.45□□□□□ -1.06
SMG1-205ENST00000561947 CLCF1Q9UBD9 225 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 TNFSF18Q9UNG2 199 aa8.45□□□□□ -1.06
SMG1-205ENST00000561947 TRAV17A0A0B4J275 112 aa8.44□□□□□ -1.06
SMG1-205ENST00000561947 A0A0D9SG52 128 aa8.44□□□□□ -1.06
SMG1-205ENST00000561947 C5orf51A6NDU8 294 aa8.44□□□□□ -1.06
SMG1-205ENST00000561947 EEF1E1-BLOC1S5C9J1V9 151 aa8.44□□□□□ -1.06
SMG1-205ENST00000561947 RPS2P15880 293 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms