RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 RAD51DO75771 328 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 ECDO95905 644 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-210ENST00000561817 NRASP01111 189 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 IGKV1D-12P01611 117 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 MT-ND4P03905 459 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 CD74P04233 296 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 CHRM2P08172 466 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 HCKP08631 526 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF735P0CB33 412 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 TRAPPC2P0DI81 140 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 TRAPPC2BP0DI82 140 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF35P13682 527 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 HLA-DMAP28067 261 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 PRSS3P35030 304 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 ECI1P42126 302 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 TGFBR3Q03167 851 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 RELQ04864 619 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-210ENST00000561817 PLP2Q04941 152 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 HLXQ14774 488 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-210ENST00000561817 P2RY6Q15077 328 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 SF3B4Q15427 424 aaKnown RBP eCLIP5.6□□□□□ -1.51
CAPN3-210ENST00000561817 EIF2S3LQ2VIR3 472 aaKnown RBP5.6□□□□□ -1.51
CAPN3-210ENST00000561817 PRR30Q53SZ7 412 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-210ENST00000561817 FAM180AQ6UWF9 173 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 FBXW12Q6X9E4 464 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 CXorf67Q86X51 503 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-210ENST00000561817 DOLPP1Q86YN1 238 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 C17orf78Q8N4C9 275 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 CISD2Q8N5K1 135 aaKnown RBP5.6□□□□□ -1.51
CAPN3-210ENST00000561817 SPERTQ8NA61 448 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 ACBD4Q8NC06 268 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 SLC30A7Q8NEW0 376 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 PXT1Q8NFP0 134 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 OR56B2PQ8NGI1 322 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 OR10R2Q8NGX6 335 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 KCNG3Q8TAE7 436 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 ENKURQ8TC29 256 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 NPRL2Q8WTW4 380 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 TNFAIP8L1Q8WVP5 186 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 HPSE2Q8WWQ2 592 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 DEDD2Q8WXF8 326 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 FAM46BQ96A09 425 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 CREB3L1Q96BA8 519 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 RNF170Q96K19 258 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 Q96M66 194 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 TECTBQ96PL2 329 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 BANF2Q9H503 90 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 OPA3Q9H6K4 179 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.6□□□□□ -1.51
CAPN3-210ENST00000561817 PTTG3PQ9NZH4 202 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 IL36GQ9NZH8 169 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 MRPL15Q9P015 296 aaKnown RBP5.6□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF107Q9UII5 783 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-210ENST00000561817 GPR160Q9UJ42 338 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 PROCRQ9UNN8 238 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 ATRXP46100 2492 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 ZGRF1Q86YA3 2104 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 IGSF10Q6WRI0 2623 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 A0A1W2PR80 420 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 METTL21EPA6NDL7 271 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 TMEM235A6NFC5 223 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 NAP1L6A6NFF2 107 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 HMX3A6NHT5 357 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 CD300LBA8K4G0 201 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF850A8MQ14 1090 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 INMT-MINDY4F8WBC2 141 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 ADAM20O43506 726 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 CA11O75493 328 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 RBBP9O75884 186 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 SCGNO76038 276 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 MPIG6BO95866 241 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 TK1P04183 234 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 TCRBP04435 133 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 CLEC3BP05452 202 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 LPLP06858 475 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 GSTP1P09211 210 aaKnown RBP5.59□□□□□ -1.51
CAPN3-210ENST00000561817 GSTT2BP0CG30 244 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 HIST1H1DP16402 221 aaKnown RBP5.59□□□□□ -1.51
CAPN3-210ENST00000561817 MGMTP16455 207 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 CCNOP22674 350 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 GIFP27352 417 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 APLNRP35414 380 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 RANBP1P43487 201 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 INPP1P49441 399 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 VEGFCP49767 419 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 CCR6P51684 374 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 FUT6P51993 359 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 RAG2P55895 527 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 MTCP1P56278 107 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 PDZK1IP1Q13113 114 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 PRDX4Q13162 271 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 SNTB2Q13425 540 aaKnown RBP5.59□□□□□ -1.51
CAPN3-210ENST00000561817 CARTPTQ16568 116 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 TATDN3Q17R31 274 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 CDNFQ49AH0 187 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 SLC22A6Q4U2R8 563 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 SIGIRRQ6IA17 410 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 PLET1Q6UQ28 207 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 SEZ6L2Q6UXD5 910 aa5.59□□□□□ -1.51
CAPN3-210ENST00000561817 Q6ZTK2 550 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms