RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 LHX4Q969G2 390 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 DUX5Q96PT3 197 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 INPP5EQ9NRR6 644 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 SMPD3Q9NY59 655 aaPredicted RBP16.98■□□□□ 0.31
TPM1-232ENST00000561425 SLC7A11Q9UPY5 501 aa16.98■□□□□ 0.31
TPM1-232ENST00000561425 IGKV1-9A0A0C4DH69 117 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 OR4C45A6NMZ5 311 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 M0R1W7 72 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 WBP4O75554 376 aaKnown RBP16.97■□□□□ 0.31
TPM1-232ENST00000561425 FADS2O95864 444 aaKnown RBP16.97■□□□□ 0.31
TPM1-232ENST00000561425 CFPP27918 469 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 PRDX2P32119 198 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 ACTA2P62736 377 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 ACTG2P63267 376 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 UTS2BQ765I0 119 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 PIP4P2Q8N4L2 257 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 ZNF561Q8N587 486 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 TMEM86BQ8N661 226 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 NRG4Q8WWG1 115 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 SLC25A28Q96A46 364 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 ADAT3Q96EY9 351 aaPredicted RBP16.97■□□□□ 0.31
TPM1-232ENST00000561425 C4orf36Q96KX1 117 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 MYCBPQ99417 103 aaPredicted RBP16.97■□□□□ 0.31
TPM1-232ENST00000561425 JAM3Q9BX67 310 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 PLEKHA1Q9HB21 404 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 SEBOXQ9HB31 216 aaPredicted RBP16.97■□□□□ 0.31
TPM1-232ENST00000561425 AMBNQ9NP70 447 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 ERVK13-1Q9NX77 482 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 MTCH1Q9NZJ7 389 aa16.97■□□□□ 0.31
TPM1-232ENST00000561425 TRBV23-1A0A0A0MS06 115 aa16.96■□□□□ 0.31
TPM1-232ENST00000561425 H3BSH0 61 aa16.96■□□□□ 0.31
TPM1-232ENST00000561425 J3QLW9 94 aa16.96■□□□□ 0.31
TPM1-232ENST00000561425 SERPINA3P01011 423 aa16.96■□□□□ 0.31
TPM1-232ENST00000561425 ZNF19P17023 458 aa16.96■□□□□ 0.31
TPM1-232ENST00000561425 ALKBH1Q13686 389 aaKnown RBP16.96■□□□□ 0.31
TPM1-232ENST00000561425 AWAT1Q58HT5 328 aa16.96■□□□□ 0.31
TPM1-232ENST00000561425 LHFPL3Q86UP9 236 aa16.96■□□□□ 0.31
TPM1-232ENST00000561425 CMTM4Q8IZR5 234 aa16.96■□□□□ 0.31
TPM1-232ENST00000561425 OR52I1Q8NGK6 324 aa16.96■□□□□ 0.31
TPM1-232ENST00000561425 TRMT10AQ8TBZ6 339 aaKnown RBP16.96■□□□□ 0.31
TPM1-232ENST00000561425 NPRL2Q8WTW4 380 aa16.96■□□□□ 0.31
TPM1-232ENST00000561425 ALG8Q9BVK2 526 aa16.96■□□□□ 0.31
TPM1-232ENST00000561425 RPL36Q9Y3U8 105 aaKnown RBP16.96■□□□□ 0.31
TPM1-232ENST00000561425 FBN3Q75N90 2809 aa16.95■□□□□ 0.3
TPM1-232ENST00000561425 FAM230AA0A1W2PPH8 454 aa16.95■□□□□ 0.3
TPM1-232ENST00000561425 HOXA3O43365 443 aaPredicted RBP16.95■□□□□ 0.3
TPM1-232ENST00000561425 NXPH2O95156 264 aa16.95■□□□□ 0.3
TPM1-232ENST00000561425 KNG1P01042 644 aa16.95■□□□□ 0.3
TPM1-232ENST00000561425 HTR1AP08908 422 aa16.95■□□□□ 0.3
TPM1-232ENST00000561425 NDUFB7P17568 137 aa16.95■□□□□ 0.3
TPM1-232ENST00000561425 C16orf87Q6PH81 154 aa16.95■□□□□ 0.3
TPM1-232ENST00000561425 H1FXQ92522 213 aaKnown RBP16.95■□□□□ 0.3
TPM1-232ENST00000561425 MRPL48Q96GC5 212 aaKnown RBP16.95■□□□□ 0.3
TPM1-232ENST00000561425 ISG20L2Q9H9L3 353 aaKnown RBP16.95■□□□□ 0.3
TPM1-232ENST00000561425 FGF20Q9NP95 211 aaPredicted RBP16.95■□□□□ 0.3
TPM1-232ENST00000561425 ONECUT1Q9UBC0 465 aa16.95■□□□□ 0.3
TPM1-232ENST00000561425 F8VVB4 439 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 F8VWA3 439 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 RNASEK-C17orf49H0YIS7 233 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 MELTFP08582 738 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 ATF1P18846 271 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 VHLP40337 213 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 FOXL1Q12952 345 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 MRPL28Q13084 256 aaKnown RBP16.94■□□□□ 0.3
TPM1-232ENST00000561425 CNN3Q15417 329 aaKnown RBP16.94■□□□□ 0.3
TPM1-232ENST00000561425 KLHL22Q53GT1 634 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 C11orf42Q8N5U0 333 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 OR10AC1Q8NH08 325 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 FGGYQ96C11 551 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 FAM234AQ9H0X4 552 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 ELL3Q9HB65 397 aaPredicted RBP16.94■□□□□ 0.3
TPM1-232ENST00000561425 HHLA2Q9UM44 414 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 POMT1Q9Y6A1 747 aa16.94■□□□□ 0.3
TPM1-232ENST00000561425 ALX3O95076 343 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 MT-ND2P03891 347 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 LIMS3P0CW19 117 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 LIMS4P0CW20 117 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 RBP2P50120 134 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 GUCA2AQ02747 115 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 ZNF691Q5VV52 312 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 LDLRAD3Q86YD5 345 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 ZNF555Q8NEP9 628 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 TMEM185AQ8NFB2 350 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 OR51A4Q8NGJ6 313 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 ZDHHC16Q969W1 377 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 BORCS8Q96FH0 119 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 CEP19Q96LK0 163 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 METTL8Q9H825 291 aaKnown RBP16.93■□□□□ 0.3
TPM1-232ENST00000561425 C19orf12Q9NSK7 152 aa16.93■□□□□ 0.3
TPM1-232ENST00000561425 A0A0U1RQK1 487 aa16.92■□□□□ 0.3
TPM1-232ENST00000561425 E9PI62 339 aa16.92■□□□□ 0.3
TPM1-232ENST00000561425 K7N7A8 449 aa16.92■□□□□ 0.3
TPM1-232ENST00000561425 SLC1A7O00341 560 aa16.92■□□□□ 0.3
TPM1-232ENST00000561425 ZNF737O75373 536 aa16.92■□□□□ 0.3
TPM1-232ENST00000561425 TK1P04183 234 aa16.92■□□□□ 0.3
TPM1-232ENST00000561425 RPSAP08865 295 aaKnown RBP16.92■□□□□ 0.3
TPM1-232ENST00000561425 PRKACBP22694 351 aa16.92■□□□□ 0.3
TPM1-232ENST00000561425 ADARB1P78563 741 aaKnown RBP16.92■□□□□ 0.3
TPM1-232ENST00000561425 SMN1Q16637 294 aaKnown RBP16.92■□□□□ 0.3
TPM1-232ENST00000561425 HCP5Q6MZN7 132 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms