RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 RTL10Q7L3V2 364 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 SNX22Q96L94 193 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 LHFPL6Q9Y693 200 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 RER1O15258 196 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 OR5H8P0DN80 308 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 IL2RGP31785 369 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 C17orf78Q8N4C9 275 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 SUMF1Q8NBK3 374 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 OR2AJ1Q8NGZ0 328 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 STT3BQ8TCJ2 826 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 RTN4IP1Q8WWV3 396 aaPredicted RBP14.45□□□□□ -0.1
TPM1-228ENST00000560975 TVP23CQ96ET8 276 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 PLEKHJ1Q9NW61 149 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 VDAC3Q9Y277 283 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 TMEM131Q92545 1883 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 MED12Q93074 2177 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 PTPRSQ13332 1948 aa14.45□□□□□ -0.1
TPM1-228ENST00000560975 ELOA3CA0A087WX78 387 aaPredicted RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 SMCO3A2RU48 225 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 ZNF850A8MQ14 1090 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 BTF3P20290 206 aaKnown RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 MFAP5Q13361 173 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 HIST2H3PS2Q5TEC6 136 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 FAM89BQ8N5H3 189 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 ZNF283Q8N7M2 679 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 MVB12AQ96EY5 273 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 NIPSNAP3BQ9BS92 247 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 UNKLQ9H9P5 680 aaKnown RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 CYP8B1Q9UNU6 501 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 WASF3Q9UPY6 502 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 B4DGG1 531 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 RPL36A-HNRNPH2H7BZ11 118 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 TCAPO15273 167 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 ST8SIA3O43173 380 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 PGA4P0DJD7 388 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 PGA5P0DJD9 388 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 KIR2DL1P43626 348 aaPredicted RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 CHAF1BQ13112 559 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 TMEM187Q14656 261 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 RSPO4Q2I0M5 234 aaPredicted RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 C16orf47Q6ZP98 133 aaPredicted RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 BEND4Q6ZU67 534 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 H1FNTQ75WM6 255 aaPredicted RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 DPPA2Q7Z7J5 298 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 C9orf40Q8IXQ3 194 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 DUSP15Q9H1R2 295 aaPredicted RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 WSB1Q9Y6I7 421 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 REV3LO60673 3130 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 ASCC3Q8N3C0 2202 aaKnown RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 CCDC163A0A0D9SF12 145 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 E9PLN8 166 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 GEMIN2O14893 280 aaKnown RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 HNRNPA2B1P22626 353 aaKnown RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 EWSR1Q01844 656 aaKnown RBP eCLIP14.44□□□□□ -0.1
TPM1-228ENST00000560975 MEX3BQ6ZN04 569 aaKnown RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 OR13H1Q8NG92 308 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 ZNF721Q8TF20 911 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 PIGTQ969N2 578 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 FAM210BQ96KR6 192 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 SOHLH2Q9NX45 425 aa14.44□□□□□ -0.1
TPM1-228ENST00000560975 FOXD3Q9UJU5 478 aaPredicted RBP14.44□□□□□ -0.1
TPM1-228ENST00000560975 A0A087WZY1 265 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 ONECUT2O95948 504 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 ZNF728P0DKX0 622 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 HOXB2P14652 356 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 GLIPR1P48060 266 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 SPCS3P61009 180 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 OR11L1Q8NGX0 322 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 HIST1H2BLQ99880 126 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 SLC25A31Q9H0C2 315 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 NAA60Q9H7X0 242 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 ZNF581Q9P0T4 197 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 A0A1B0GW64 132 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 FAM221BA6H8Z2 402 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 TMEM150CB9EJG8 249 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 TSPAN2O60636 221 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 DDAH2O95865 285 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 IFNA10P01566 189 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 DBHP09172 617 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 FCGR2AP12318 317 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 CSNK1A1P48729 337 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 ICAM4Q14773 271 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 OR8G1Q15617 311 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 SLC7A11Q9UPY5 501 aa14.43□□□□□ -0.1
TPM1-228ENST00000560975 A0A087WWC5 75 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 FAM221AA4D161 298 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 SCAF4O95104 1147 aaKnown RBP14.42□□□□□ -0.1
TPM1-228ENST00000560975 DUSP1P28562 367 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 FZD2Q14332 565 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 FAM189A2Q15884 450 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 NAXEQ8NCW5 288 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 DYRK2Q92630 601 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 FAAP24Q9BTP7 215 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 SHANK1Q9Y566 2161 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 BLACEA4D250 179 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 FOXI3A8MTJ6 420 aaPredicted RBP14.42□□□□□ -0.1
TPM1-228ENST00000560975 SERPINE3A8MV23 424 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 MSTNO14793 375 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 TNFP01375 233 aa14.42□□□□□ -0.1
TPM1-228ENST00000560975 NTSR1P30989 418 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms