RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 NLKQ9UBE8 527 aa12.93□□□□□ -0.34
LYSMD2-204ENST00000560491 DOCK11Q5JSL3 2073 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 A8MV72 311 aaPredicted RBP12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 KIAA1324LA8MWY0 1029 aaPredicted RBP12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 INAFM1C9JVW0 142 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 TMPRSS2O15393 492 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 ANGPTL7O43827 346 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 NOS1APO75052 506 aaPredicted RBP12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 FCN3O75636 299 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 ALX3O95076 343 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 NXPH2O95156 264 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 CPEP16870 476 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 IGFBP3P17936 291 aaPredicted RBP12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 PCMT1P22061 227 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 PITPNBP48739 271 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 RPS25P62851 125 aaKnown RBP12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 GNB2P62879 340 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 PPP3R1P63098 170 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 GPR50Q13585 617 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 KISS1Q15726 138 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 KCTD21Q4G0X4 260 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 FAM27D1Q5T7N8 215 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 ZNF773Q6PK81 442 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 ZNF841Q6ZN19 808 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 ACP7Q6ZNF0 438 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 NLRC3Q7RTR2 1065 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 GLCCI1Q86VQ1 547 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 FGFRL1Q8N441 504 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 FAM216BQ8N7L0 139 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 TMEM186Q96B77 213 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 C12orf43Q96C57 262 aaKnown RBP12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 SSBP3Q9BWW4 388 aaPredicted RBP12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 NEK6Q9HC98 313 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 HES4Q9HCC6 221 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 SMURF1Q9HCE7 757 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 NOX4Q9NPH5 578 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 HIF1ANQ9NWT6 349 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 KCNS2Q9ULS6 477 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 LRCH1Q9Y2L9 728 aa12.92□□□□□ -0.34
LYSMD2-204ENST00000560491 SVEP1Q4LDE5 3571 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 IGKV1D-17A0A075B6S4 117 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 OR2AT4A6NND4 320 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 A8MXK9 166 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 NDUFA2O43678 99 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 FOXH1O75593 365 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 CALCBP10092 127 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 PSG2P11465 335 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 SELLP14151 372 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 FSTP19883 344 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 BCL3P20749 454 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 NPBWR2P48146 333 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 CEBPDP49716 269 aaPredicted RBP12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 DVL1P1P54792 670 aaPredicted RBP12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 ZP1P60852 638 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 ERVK11-1P61568 191 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 PDZK1IP1Q13113 114 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 SSX1Q16384 188 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 SMIM21Q3B7S5 101 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 ACSM3Q53FZ2 586 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 SATL1Q86VE3 508 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 PHC2Q8IXK0 858 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 MS4A15Q8N5U1 240 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 ANGPTL6Q8NI99 470 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 CEP19Q96LK0 163 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 RBFOX1Q9NWB1 397 aaKnown RBP12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 RASL12Q9NYN1 266 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 CKLFQ9UBR5 152 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 CLN8Q9UBY8 286 aa12.91□□□□□ -0.34
LYSMD2-204ENST00000560491 TRAV20A0A0B4J274 112 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 IGKV1-12A0A0C4DH73 117 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 TRAPPC2LH3BP13 241 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 GABRPO00591 440 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 MAGEB3O15480 346 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 SC5DO75845 299 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 CYB5AP00167 134 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 IGKV1D-12P01611 117 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 ACAA1P09110 424 aaPredicted RBP12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 MAPK3P27361 379 aaPredicted RBP12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 BDKRB2P30411 391 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 TGFBR2P37173 567 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 GABRA2P47869 451 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 IKZF1Q13422 519 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 ARMCX4Q5H9R4 360 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 DDI2Q5TDH0 399 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 UBE2UQ5VVX9 321 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 WDR25Q64LD2 544 aaPredicted RBP12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 UNQ9370/PRO34162Q6UXP9 181 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 MKXQ8IYA7 352 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 EMG1Q92979 244 aaKnown RBP12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 GAFA1Q96PS6 74 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 GPER1Q99527 375 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 PPIL3Q9H2H8 161 aaKnown RBP12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 TMEM138Q9NPI0 162 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 MMP26Q9NRE1 261 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 IL36RNQ9UBH0 155 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 KAAG1Q9UBP8 84 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 OR14J1Q9UGF5 321 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 ZNF222Q9UK12 451 aa12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 SF3B6Q9Y3B4 125 aaKnown RBP12.9□□□□□ -0.34
LYSMD2-204ENST00000560491 MTORP42345 2549 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms