RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 TRMT10AQ8TBZ6 339 aaKnown RBP10□□□□□ -0.81
LDLR-212ENST00000560467 TNFAIP8L1Q8WVP5 186 aa10□□□□□ -0.81
LDLR-212ENST00000560467 S100ZQ8WXG8 99 aa10□□□□□ -0.81
LDLR-212ENST00000560467 OR5P3Q8WZ94 311 aa10□□□□□ -0.81
LDLR-212ENST00000560467 MRPL24Q96A35 216 aaKnown RBP10□□□□□ -0.81
LDLR-212ENST00000560467 S100A16Q96FQ6 103 aaKnown RBP10□□□□□ -0.81
LDLR-212ENST00000560467 CMTM3Q96MX0 182 aa10□□□□□ -0.81
LDLR-212ENST00000560467 ADAT1Q9BUB4 502 aaKnown RBP10□□□□□ -0.81
LDLR-212ENST00000560467 EGLN1Q9GZT9 426 aa10□□□□□ -0.81
LDLR-212ENST00000560467 POFUT1Q9H488 388 aa10□□□□□ -0.81
LDLR-212ENST00000560467 LIN7BQ9HAP6 207 aa10□□□□□ -0.81
LDLR-212ENST00000560467 TAAR3PQ9P1P4 343 aa10□□□□□ -0.81
LDLR-212ENST00000560467 FZR1Q9UM11 496 aa10□□□□□ -0.81
LDLR-212ENST00000560467 MRPS28Q9Y2Q9 187 aaKnown RBP10□□□□□ -0.81
LDLR-212ENST00000560467 MALRD1Q5VYJ5 2156 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 TMEM210A6NLX4 147 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 ZNF732B4DXR9 585 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 TPD52L2O43399 206 aaKnown RBP9.99□□□□□ -0.81
LDLR-212ENST00000560467 SCGNO76038 276 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 BPNT1O95861 308 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 ADRA2CP18825 462 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 MPV17P39210 176 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 PTGFRP43088 359 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 SRP9P49458 86 aaKnown RBP9.99□□□□□ -0.81
LDLR-212ENST00000560467 PDLIM4P50479 330 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 PRSS12P56730 875 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 SNRPD2P62316 118 aaKnown RBP9.99□□□□□ -0.81
LDLR-212ENST00000560467 MST1LQ2TV78 715 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 C1orf100Q5SVJ3 147 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 KRT74Q7RTS7 529 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 SAMD12Q8N8I0 201 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 ZSCAN4Q8NAM6 433 aaPredicted RBP9.99□□□□□ -0.81
LDLR-212ENST00000560467 OR2Z1Q8NG97 314 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 OR51A2Q8NGJ7 313 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 KCNG3Q8TAE7 436 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 C15orf40Q8WUR7 153 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 FAM3DQ96BQ1 224 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 C1orf159Q96HA4 380 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 SYT3Q9BQG1 590 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 SLC30A2Q9BRI3 323 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 PIMREGQ9BSJ6 248 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 BARHL1Q9BZE3 327 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 METTL9Q9H1A3 318 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 MS4A5Q9H3V2 200 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 SMURF1Q9HCE7 757 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 HMG20AQ9NP66 347 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 DYNLRB1Q9NP97 96 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 DIABLOQ9NR28 239 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 RABL2AQ9UBK7 228 aaPredicted RBP9.99□□□□□ -0.81
LDLR-212ENST00000560467 SPATA2Q9UM82 520 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 RABL2BQ9UNT1 228 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 POLDIP2Q9Y2S7 368 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 PMF1-BGLAPU3KQ54 211 aa9.99□□□□□ -0.81
LDLR-212ENST00000560467 SHISA3A0PJX4 238 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 B9A039 149 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 SLC2A2P11168 524 aaPredicted RBP9.98□□□□□ -0.81
LDLR-212ENST00000560467 HNF1AP20823 631 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 POU3F4P49335 361 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 ZNF81P51508 661 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 GPM6AP51674 278 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 P2RY14Q15391 338 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 SWI5Q1ZZU3 235 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 CR1LQ2VPA4 569 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 GLIPR1L1Q6UWM5 242 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 LRRC28Q86X40 367 aaPredicted RBP9.98□□□□□ -0.81
LDLR-212ENST00000560467 RAB40AQ8WXH6 277 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 DIRAS2Q96HU8 199 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 URM1Q9BTM9 101 aaKnown RBP9.98□□□□□ -0.81
LDLR-212ENST00000560467 NXF2Q9GZY0 626 aaKnown RBP9.98□□□□□ -0.81
LDLR-212ENST00000560467 CNTD2Q9H8S5 307 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 RAB22AQ9UL26 194 aa9.98□□□□□ -0.81
LDLR-212ENST00000560467 IGLV3-9A0A075B6K5 115 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 IGKV1-9A0A0C4DH69 117 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 LRP5LA4QPB2 252 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 FABP12A6NFH5 140 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 TRAPPC2LH3BP13 241 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 M0R233 179 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 TGFAP01135 160 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 APOA1P02647 267 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 GRPP07492 148 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 TNFRSF1AP19438 455 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 CFPP27918 469 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 HAAOP46952 286 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 PITPNAQ00169 270 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 ADIPOQQ15848 244 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 PCGF3Q3KNV8 242 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 C2orf76Q3KRA6 126 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 FAM209AQ5JX71 171 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 UBE2NLQ5JXB2 153 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 FIP1L1Q6UN15 594 aaKnown RBP9.97□□□□□ -0.81
LDLR-212ENST00000560467 BAIAP2L2Q6UXY1 529 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 OR2W3Q7Z3T1 314 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 Q8IYB0 196 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 SAXO1Q8IYX7 474 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 OR6Q1Q8NGQ2 317 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 OR51F2Q8NH61 342 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 TBC1D15Q8TC07 691 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 UBASH3BQ8TF42 649 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 PTX4Q96A99 478 aa9.97□□□□□ -0.81
LDLR-212ENST00000560467 ELMOD3Q96FG2 381 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms