RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ARHGAP21Q5T5U3 1957 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 PMS2P1A4D2B8 440 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 RNF222A6NCQ9 220 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 PDCD6O75340 191 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 HTR3BO95264 441 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 NMBP08949 121 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 AKR1C4P17516 323 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 VAMP1P23763 118 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 UCP3P55916 312 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 ARPC4P59998 168 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 NAAAQ02083 359 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 PLP2Q04941 152 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 PDZK1IP1Q13113 114 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 SLC10A1Q14973 349 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 AANATQ16613 207 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 TOR2AQ5JU69 321 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 AADACL3Q5VUY0 350 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 ZNF660Q6AZW8 331 aaPredicted RBP8.41□□□□□ -1.06
RTF1-206ENST00000560447 TMEM211Q6ICI0 200 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 RGS7BPQ6MZT1 257 aaPredicted RBP8.41□□□□□ -1.06
RTF1-206ENST00000560447 RPUSD3Q6P087 351 aaKnown RBP8.41□□□□□ -1.06
RTF1-206ENST00000560447 IGF2-ASQ6U949 168 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 C17orf107Q6ZR85 190 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 HSD17B13Q7Z5P4 300 aaPredicted RBP8.41□□□□□ -1.06
RTF1-206ENST00000560447 PIP4P1Q86T03 277 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 MCEMP1Q8IX19 187 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 PDZD9Q8IXQ8 264 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 CCDC36Q8IYA8 594 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 INO80EQ8NBZ0 244 aaPredicted RBP8.41□□□□□ -1.06
RTF1-206ENST00000560447 ADAD2Q8NCV1 583 aaKnown RBP8.41□□□□□ -1.06
RTF1-206ENST00000560447 OR5D18Q8NGL1 313 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 NPRL2Q8WTW4 380 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 TMEM230Q96A57 120 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 PIK3IP1Q96FE7 263 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 CNTNAP3BQ96NU0 1288 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 RTBDNQ9BSG5 229 aaPredicted RBP8.41□□□□□ -1.06
RTF1-206ENST00000560447 CNTNAP3Q9BZ76 1288 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 PRRG4Q9BZD6 226 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 FN3KRPQ9HA64 309 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 ELL3Q9HB65 397 aaPredicted RBP8.41□□□□□ -1.06
RTF1-206ENST00000560447 CHMP1AQ9HD42 196 aaPredicted RBP8.41□□□□□ -1.06
RTF1-206ENST00000560447 GLRX2Q9NS18 164 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 SLC7A10Q9NS82 523 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 NECAP2Q9NVZ3 263 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 C1orf123Q9NWV4 160 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 DNAJB11Q9UBS4 358 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 ANXA10Q9UJ72 324 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 NUP50Q9UKX7 468 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 ZDBF2Q9HCK1 2354 aa8.41□□□□□ -1.06
RTF1-206ENST00000560447 FAM230AA0A1W2PPH8 454 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 KRBOX1C9JBD0 128 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 GLAP06280 429 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 EDN3P14138 238 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 NUP62P37198 522 aaPredicted RBP8.4□□□□□ -1.06
RTF1-206ENST00000560447 MAGEA5P43359 124 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 NPY4RP50391 375 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 PPIAP62937 165 aaKnown RBP8.4□□□□□ -1.06
RTF1-206ENST00000560447 EIF5AP63241 154 aaKnown RBP8.4□□□□□ -1.06
RTF1-206ENST00000560447 ZNF92Q03936 586 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 MPV17LQ2QL34 196 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 CCDC157Q569K6 752 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 PLCXD3Q63HM9 321 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 DHRS11Q6UWP2 260 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 DHRS13Q6UX07 377 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 CLEC18BQ6UXF7 455 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 MOB3CQ70IA8 216 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 DTX1Q86Y01 620 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 IL22RA1Q8N6P7 574 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 OR5L1Q8NGL2 311 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 OR2AE1Q8NHA4 323 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 STOML3Q8TAV4 291 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 ST8SIA2Q92186 375 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 GTF3AQ92664 365 aaKnown RBP8.4□□□□□ -1.06
RTF1-206ENST00000560447 RBPMSQ93062 196 aaKnown RBP8.4□□□□□ -1.06
RTF1-206ENST00000560447 C2orf50Q96LR7 162 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 CMSS1Q9BQ75 279 aaKnown RBP8.4□□□□□ -1.06
RTF1-206ENST00000560447 ST6GALNAC5Q9BVH7 336 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 SLC6A15Q9H2J7 730 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 PLK3Q9H4B4 646 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 ZDHHC11Q9H8X9 412 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 ZNF286AQ9HBT8 521 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 ZFP57Q9NU63 452 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 FAM86C1Q9NVL1 165 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 RASL12Q9NYN1 266 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 MPC1Q9Y5U8 109 aa8.4□□□□□ -1.06
RTF1-206ENST00000560447 IGKV1-27A0A075B6S5 117 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 PIGBOS1A0A0B4J2F0 54 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 TEX13DA0A0J9YY54 714 aaPredicted RBP8.39□□□□□ -1.07
RTF1-206ENST00000560447 PQLC2LA1A4F0 135 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 C5orf51A6NDU8 294 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 NUDT19A8MXV4 375 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 I3L521 148 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 FCGR3AP08637 254 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 RPS2P15880 293 aaKnown RBP8.39□□□□□ -1.07
RTF1-206ENST00000560447 FUT3P21217 361 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 ZP3P21754 424 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 GABRR1P24046 479 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 SERPINF1P36955 418 aa8.39□□□□□ -1.07
RTF1-206ENST00000560447 RBMXP38159 391 aaKnown RBP8.39□□□□□ -1.07
RTF1-206ENST00000560447 RBM11P57052 281 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms