RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 RPP14O95059 124 aaKnown RBP11.54□□□□□ -0.56
TPM1-223ENST00000560445 RBP4P02753 201 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 OCM2P0CE71 109 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 OCMP0CE72 109 aaPredicted RBP11.54□□□□□ -0.56
TPM1-223ENST00000560445 SELLP14151 372 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 EPHA2P29317 976 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 FUT6P51993 359 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 LGALS4P56470 323 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 BCDIN3DQ7Z5W3 292 aaKnown RBP11.54□□□□□ -0.56
TPM1-223ENST00000560445 ZSCAN4Q8NAM6 433 aaPredicted RBP11.54□□□□□ -0.56
TPM1-223ENST00000560445 OR14K1Q8NGZ2 314 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 FOXRED1Q96CU9 486 aaPredicted RBP11.54□□□□□ -0.56
TPM1-223ENST00000560445 BORCS8Q96FH0 119 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 CHST5Q9GZS9 411 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 C16orf95Q9H693 158 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 GPR173Q9NS66 373 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 GLS2Q9UI32 602 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 MAB21L2Q9Y586 359 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 PCDHGB5Q9Y5G0 923 aa11.54□□□□□ -0.56
TPM1-223ENST00000560445 A0A1W2PQL4 384 aaPredicted RBP11.53□□□□□ -0.56
TPM1-223ENST00000560445 SAC3D1A6NKF1 404 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 PRR32B1ATL7 298 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 H3BUI4 141 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 M0R129 80 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 CHRM2P08172 466 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 PRKACBP22694 351 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 ACTA2P62736 377 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 ACTG2P63267 376 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 ELF3P78545 371 aaPredicted RBP11.53□□□□□ -0.56
TPM1-223ENST00000560445 TMEM244Q5VVB8 128 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 GDPD3Q7L5L3 318 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 CATSPERDQ86XM0 798 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 EGFL6Q8IUX8 553 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 FGFRL1Q8N441 504 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 DNAAF1Q8NEP3 725 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 OR4C13Q8NGP0 309 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 PPP1R35Q8TAP8 253 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 HAVCR2Q8TDQ0 301 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 PYDC1Q8WXC3 89 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 TNFRSF14Q92956 283 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 UBE2FQ969M7 185 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 CEP19Q96LK0 163 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 TBX5Q99593 518 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 CITED1Q99966 193 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 HES4Q9HCC6 221 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 GNG8Q9UK08 70 aa11.53□□□□□ -0.56
TPM1-223ENST00000560445 A0A1B0GTI1 187 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 FAM230AA0A1W2PPH8 454 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 EBAG9O00559 213 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 SYNGR1O43759 233 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 MPZL2O60487 215 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 CLPXO76031 633 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 TK1P04183 234 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 ZNF20P17024 532 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 LRRC75BQ2VPJ9 315 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 SLC25A30Q5SVS4 291 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 MKXQ8IYA7 352 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 ASCC1Q8N9N2 400 aaKnown RBP11.52□□□□□ -0.57
TPM1-223ENST00000560445 LINC01006Q8NI28 216 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 MMP27Q9H306 513 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 RANBP3Q9H6Z4 567 aaPredicted RBP11.52□□□□□ -0.57
TPM1-223ENST00000560445 SEBOXQ9HB31 216 aaPredicted RBP11.52□□□□□ -0.57
TPM1-223ENST00000560445 OR14J1Q9UGF5 321 aa11.52□□□□□ -0.57
TPM1-223ENST00000560445 LOC107986453A0A1B0GWG9 222 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 DAPL1A0PJW8 107 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 TSPAN9O75954 239 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 POLR2IP36954 125 aaKnown RBP11.51□□□□□ -0.57
TPM1-223ENST00000560445 RBP2P50120 134 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 ATP1B3P54709 279 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 RELBQ01201 579 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 MEF2CQ06413 473 aaPredicted RBP11.51□□□□□ -0.57
TPM1-223ENST00000560445 MRPL28Q13084 256 aaKnown RBP11.51□□□□□ -0.57
TPM1-223ENST00000560445 KLRD1Q13241 179 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 KPNB1Q14974 876 aaKnown RBP11.51□□□□□ -0.57
TPM1-223ENST00000560445 TAF9Q16594 264 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 CD177Q8N6Q3 437 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 OR13D1Q8NGV5 346 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 RORBQ92753 470 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 EME1Q96AY2 570 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 SPSB1Q96BD6 273 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 CPNE2Q96FN4 548 aaPredicted RBP11.51□□□□□ -0.57
TPM1-223ENST00000560445 HRASLS5Q96KN8 279 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 Q96MT0 163 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 NPFFR1Q9GZQ6 430 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 ELL3Q9HB65 397 aaPredicted RBP11.51□□□□□ -0.57
TPM1-223ENST00000560445 RHOFQ9HBH0 211 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 TCF7L1Q9HCS4 588 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 C19orf12Q9NSK7 152 aa11.51□□□□□ -0.57
TPM1-223ENST00000560445 A0A1W2PRD5 423 aa11.5□□□□□ -0.57
TPM1-223ENST00000560445 A0A1W2PRF3 423 aa11.5□□□□□ -0.57
TPM1-223ENST00000560445 A0A1W2PRM7 423 aa11.5□□□□□ -0.57
TPM1-223ENST00000560445 hADV38S2A0JD32 116 aa11.5□□□□□ -0.57
TPM1-223ENST00000560445 FUOMA2VDF0 154 aa11.5□□□□□ -0.57
TPM1-223ENST00000560445 H3BUX3 64 aa11.5□□□□□ -0.57
TPM1-223ENST00000560445 K7N7A8 449 aa11.5□□□□□ -0.57
TPM1-223ENST00000560445 ALPLP05186 524 aa11.5□□□□□ -0.57
TPM1-223ENST00000560445 GABRA5P31644 462 aa11.5□□□□□ -0.57
TPM1-223ENST00000560445 ALDH3A2P51648 485 aa11.5□□□□□ -0.57
TPM1-223ENST00000560445 PROK1P58294 105 aa11.5□□□□□ -0.57
TPM1-223ENST00000560445 ERVK11-1P61568 191 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms