RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 FBXW5Q969U6 566 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 ST6GAL2Q96JF0 529 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 HIST1H2AAQ96QV6 131 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 SLC6A7Q99884 636 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 C7orf50Q9BRJ6 194 aaKnown RBP9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 ACTR6Q9GZN1 396 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 GHRLQ9UBU3 117 aa9.31□□□□□ -0.92
SNRPA1-211ENST00000560433 PKD1L2Q7Z442 2459 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 IGHV2OR16-5A0A0B4J2B6 119 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 TRGV8A0A0C4DH27 118 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 UBE2QL1A1L167 161 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 FOXI3A8MTJ6 420 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 DHFRP00374 187 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 CST4P01036 141 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 CPT2P23786 658 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 TAS2R19P59542 299 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 UBE2MP61081 183 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 ATAD3CQ5T2N8 411 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 IDO2Q6ZQW0 420 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 C5orf24Q7Z6I8 188 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 CCDC36Q8IYA8 594 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 FTMTQ8N4E7 242 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 BPIFB2Q8N4F0 458 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 C1orf162Q8NEQ5 155 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 CSNK2A3Q8NEV1 391 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 STEAP2Q8NFT2 490 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 CAPSLQ8WWF8 208 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 OR5P3Q8WZ94 311 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 SFXN3Q9BWM7 321 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 MSL2Q9HCI7 577 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 ZNF701Q9NV72 531 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 TAS2R8Q9NYW2 309 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 DIDO1Q9BTC0 2240 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 PLCE1Q9P212 2302 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 IGKV1D-8A0A087WSZ0 117 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 SULT1C2O00338 296 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 SDCBPO00560 298 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 MSTNO14793 375 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 TPD52L2O43399 206 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 OR7C1O76099 320 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 MELTFP08582 738 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 DAZAP2Q15038 168 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 MSMPQ1L6U9 139 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 WDR86Q86TI4 376 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 LRP11Q86VZ4 500 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 TM2D1Q9BX74 207 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 SCPEP1Q9HB40 452 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 ING3Q9NXR8 418 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 DUSP13Q9UII6 198 aa9.3□□□□□ -0.92
SNRPA1-211ENST00000560433 MED19A0JLT2 244 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 NAP1L6A6NFF2 107 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 HMX3A6NHT5 357 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 ICMTO60725 284 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 CRHP06850 196 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 GRPP07492 148 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 CCKARP32238 428 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 OPRM1P35372 400 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 FAUP35544 74 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 FCN2Q15485 313 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 FBXW12Q6X9E4 464 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 CDH24Q86UP0 819 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 TMEM229BQ8NBD8 167 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 RELL2Q8NC24 303 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 MARS2Q96GW9 593 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 SULT4A1Q9BR01 284 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 OBP2BQ9NPH6 170 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 TPPPO94811 219 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 NDUFB6O95139 128 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 IGLV1-44P01699 117 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 ZNF735P0CB33 412 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 CXCL3P19876 107 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 MICBQ29980 383 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 ZBTB37Q5TC79 503 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 TMED4Q7Z7H5 227 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 OR4K15Q8NH41 348 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 GTF3AQ92664 365 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 MICU1Q9BPX6 476 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 GHITMQ9H3K2 345 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 MOV10Q9HCE1 1003 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 COPZ2Q9P299 210 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 AK3Q9UIJ7 227 aa9.29□□□□□ -0.92
SNRPA1-211ENST00000560433 LRBAP50851 2863 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 SHANK1Q9Y566 2161 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 CDIPTO14735 213 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 PEX14O75381 377 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 VSIG10L2P0DP72 767 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 RRAS2P62070 204 aaPredicted RBP9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 NAAAQ02083 359 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 PPA1Q15181 289 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 RBMS2Q15434 407 aaKnown RBP9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 RNASE10Q5GAN6 216 aaKnown RBP9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 ASCL4Q6XD76 172 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 UXS1Q8NBZ7 420 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 OR5A2Q8NGI9 324 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 ST8SIA4Q92187 359 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 MUCL1Q96DR8 90 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 CPNE2Q96FN4 548 aaPredicted RBP9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 ADAT1Q9BUB4 502 aaKnown RBP9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 ZNF221Q9UK13 617 aa9.28□□□□□ -0.92
SNRPA1-211ENST00000560433 ZNF835Q9Y2P0 537 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms