RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 ELMOD3Q96FG2 381 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 TMEM204Q9BSN7 226 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 TMEM59Q9BXS4 323 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 MRPL37Q9BZE1 423 aaKnown RBP5.48□□□□□ -1.53
SPG11-221ENST00000560299 EGLN1Q9GZT9 426 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 MSL2Q9HCI7 577 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 DYNLRB1Q9NP97 96 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 AKIP1Q9NQ31 210 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 IL36GQ9NZH8 169 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 CRIM1Q9NZV1 1036 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 IL19Q9UHD0 177 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 GLS2Q9UI32 602 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 NBPF19A0A087WUL8 3843 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 POLQO75417 2590 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 CCDC168Q8NDH2 2452 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 OTOGQ6ZRI0 2925 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 IGKV1-27A0A075B6S5 117 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 A0A1B0GWJ7 208 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 TMEM14DPA8MWL7 114 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 DEFB108AA8MXU0 73 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 E7EQL1 145 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 LDLRAD4O15165 306 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 AKR7A2O43488 359 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 XRCC3O43542 346 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 SPRY1O43609 319 aaPredicted RBP5.47□□□□□ -1.53
SPG11-221ENST00000560299 SPRY3O43610 288 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 CDC14BO60729 498 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 LILRA1O75019 489 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 CTAG2O75638 210 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 MPIG6BO95866 241 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 PLATP00750 562 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 EIF4EP06730 217 aaKnown RBP5.47□□□□□ -1.53
SPG11-221ENST00000560299 GRPP07492 148 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 ACAA1P09110 424 aaPredicted RBP5.47□□□□□ -1.53
SPG11-221ENST00000560299 VSIG8P0DPA2 414 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 IRF2P14316 349 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 MGMTP16455 207 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 SERPINA2P20848 420 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 CPT2P23786 658 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 MPZP25189 248 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 CD200P41217 278 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 INPP1P49441 399 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 SNRPD2P62316 118 aaKnown RBP5.47□□□□□ -1.53
SPG11-221ENST00000560299 MRPS10P82664 201 aaKnown RBP5.47□□□□□ -1.53
SPG11-221ENST00000560299 TNFAIP6P98066 277 aaPredicted RBP5.47□□□□□ -1.53
SPG11-221ENST00000560299 DCTN2Q13561 401 aaKnown RBP5.47□□□□□ -1.53
SPG11-221ENST00000560299 EFNB3Q15768 340 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 PCGF3Q3KNV8 242 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 PYDC2Q56P42 97 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 AGAP6Q5VW22 663 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 ELP2Q6IA86 826 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 LRP11Q86VZ4 500 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 CMTM4Q8IZR5 234 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 OSR2Q8N2R0 312 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 MUC15Q8N387 334 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 SCCPDHQ8NBX0 429 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 OR10AD1Q8NGE0 317 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 OR51T1Q8NGJ9 327 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 MBD6Q96DN6 1003 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 NUDT16L1Q9BRJ7 211 aaKnown RBP5.47□□□□□ -1.53
SPG11-221ENST00000560299 CCDC32Q9BV29 185 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 SELENOIQ9C0D9 397 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 MIXL1Q9H2W2 232 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 OR51I2Q9H344 312 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 CXorf56Q9H5V9 222 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 FN3KRPQ9HA64 309 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 PALMDQ9NP74 551 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 DECR2Q9NUI1 292 aa5.47□□□□□ -1.53
SPG11-221ENST00000560299 MRPS7Q9Y2R9 242 aaKnown RBP5.47□□□□□ -1.53
SPG11-221ENST00000560299 HRNRQ86YZ3 2850 aaPredicted RBP5.46□□□□□ -1.53
SPG11-221ENST00000560299 CREBBPQ92793 2442 aa5.46□□□□□ -1.53
SPG11-221ENST00000560299 hCG_1807616A0A1W2PRN6 198 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A10PA6NDY2 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A18PA6NE21 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A16PA6NEW6 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A20PA6NIJ5 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A8PA6NJQ4 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A7PA6NKC0 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 LRRC30A6NM36 301 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 A6NNC1 897 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 C17orf100A8MU93 164 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A22PA8MWA6 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A12PA8MX19 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A5PA8MXJ8 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A23PA8MXZ1 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 F5H5P2 479 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 H0YL77 283 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 C19orf84I3L1E1 186 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 IFNL4K9M1U5 179 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 HS3ST1O14792 307 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 CTDSPLO15194 276 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 MLNRO43193 412 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 ANGPTL7O43827 346 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 NXPH2O95156 264 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 CD55P08174 381 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 ADH4P08319 380 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 INHBBP09529 407 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A15PP0C7V4 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A13PP0C7W8 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A14PP0C7W9 464 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms