RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CELSR2Q9HCU4 2923 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 HECTD1Q9ULT8 2610 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 TACC2O95359 2948 aa4.4□□□□□ -1.7
SPG11-220ENST00000559933 POLQO75417 2590 aa4.4□□□□□ -1.7
SPG11-220ENST00000559933 TRAV1-2A0A0B4J238 106 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 C9orf118A6NHY6 69 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 TRIM64BA6NI03 449 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 CDIPTO14735 213 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 AKR7A2O43488 359 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 CDC14BO60729 498 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 CTAG2O75638 210 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 ARL6IP5O75915 188 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 KDM4BO94953 1096 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 IGHV3-13P01766 116 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 DANCRP0C864 163 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 OCMP0CE72 109 aaPredicted RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 ZNF12P17014 697 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 BCL3P20749 454 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 GALP22466 123 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 CFL1P23528 166 aaKnown RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 APOBEC3AP31941 199 aaPredicted RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 CD80P33681 288 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 ZNF93P35789 620 aaPredicted RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 PMELP40967 661 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 HAAOP46952 286 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 NPBWR2P48146 333 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 CEBPDP49716 269 aaPredicted RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 MTCP1P56278 107 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 TNFAIP6P98066 277 aaPredicted RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 TLE4Q04727 773 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 UNC119Q13432 240 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 DAZAP2Q15038 168 aaPredicted RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 CNN3Q15417 329 aaKnown RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 KISS1Q15726 138 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 RAB11BQ15907 218 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 CEACAM21Q3KPI0 293 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 HAGHLQ6PII5 290 aaPredicted RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 TEPPQ6URK8 271 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 GLIPR1L1Q6UWM5 242 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 GDPGP1Q6ZNW5 385 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 SLC25A26Q70HW3 274 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 UTS2BQ765I0 119 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 MOGAT3Q86VF5 341 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 LAX1Q8IWV1 398 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 C11orf53Q8IXP5 236 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 IZUMO1Q8IYV9 350 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 FBXL14Q8N1E6 418 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 BOLLQ8N9W6 283 aaKnown RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 TMEM104Q8NE00 496 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 CSNK2A3Q8NEV1 391 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 OR51D1Q8NGF3 324 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 OR8S1Q8NH09 359 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 TNFAIP8L1Q8WVP5 186 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 PP6455Q8WZ26 134 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 SLC25A28Q96A46 364 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 BORCS8Q96FH0 119 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 C1orf147Q96MC9 270 aaPredicted RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 SORCS2Q96PQ0 1159 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 OR2V2Q96R30 315 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 GPER1Q99527 375 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 NICN1Q9BSH3 213 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 TRAF4Q9BUZ4 470 aaPredicted RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 CACNG6Q9BXT2 260 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 SLIRPQ9GZT3 109 aaKnown RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 SLITRK2Q9H156 845 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 WDR13Q9H1Z4 485 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 MIXL1Q9H2W2 232 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 PLEKHF2Q9H8W4 249 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 ELL3Q9HB65 397 aaPredicted RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 PLGRKTQ9HBL7 147 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 SMURF1Q9HCE7 757 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 TMEM138Q9NPI0 162 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 BATF3Q9NR55 127 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 TMEM100Q9NV29 134 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 RBFOX1Q9NWB1 397 aaKnown RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 C1orf123Q9NWV4 160 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 CCDC59Q9P031 241 aaKnown RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 CKLFQ9UBR5 152 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 OR5V1Q9UGF6 321 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 ZNF391Q9UJN7 358 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 FBXL7Q9UJT9 491 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 FOXJ3Q9UPW0 622 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 GSTK1Q9Y2Q3 226 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 MRPS28Q9Y2Q9 187 aaKnown RBP4.4□□□□□ -1.71
SPG11-220ENST00000559933 V9GY05 133 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 CENPEQ02224 2701 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 ARFGEF3Q5TH69 2177 aa4.4□□□□□ -1.71
SPG11-220ENST00000559933 IGHV3OR15-7A0A075B7D8 119 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 A0A0A6YYD4 124 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 TMEM272A0A1B0GTI8 110 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 A0A1B0GW55 424 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 hCG_1807616A0A1W2PRN6 198 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 PLSCR5A0PG75 271 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 A6NLC8 198 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 IFITM5A6NNB3 132 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 DHRS7CA6NNS2 312 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 C17orf100A8MU93 164 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 M0R233 179 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 AIPO00170 330 aa4.39□□□□□ -1.71
SPG11-220ENST00000559933 SLC17A2O00624 439 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms