RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 LHX4Q969G2 390 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 RFT1Q96AA3 541 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 BORCS8Q96FH0 119 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 MRPL48Q96GC5 212 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 MED30Q96HR3 178 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 SPACA5Q96QH8 159 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 PDCD1LG2Q9BQ51 273 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 DCTN5Q9BTE1 182 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 DNTTIP1Q9H147 329 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 CNTD2Q9H8S5 307 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 RASL12Q9NYN1 266 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 MTCH1Q9NZJ7 389 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 CLEC2DQ9UHP7 191 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 HHLA2Q9UM44 414 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 POLDIP2Q9Y2S7 368 aa12.24□□□□□ -0.45
RABGGTA-211ENST00000559850 A0A0A6YYJ9 748 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 ECDO95905 644 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 LIPFP07098 398 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 PPIAL4GP0DN37 164 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 AZGP1P25311 298 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 PRDX2P32119 198 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 POU3F4P49335 361 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 SMIM21Q3B7S5 101 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 VMO1Q7Z5L0 202 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 LY6G5BQ8NDX9 201 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 SETD9Q8NE22 299 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 CCDC54Q8NEL0 328 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 OR13C9Q8NGT0 318 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 PP6455Q8WZ26 134 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 GGHQ92820 318 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 C1orf147Q96MC9 270 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 PKIBQ9C010 78 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 DCLRE1BQ9H816 532 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 SIRT7Q9NRC8 400 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 IL36RNQ9UBH0 155 aa12.23□□□□□ -0.45
RABGGTA-211ENST00000559850 TRBV2A0A0J9YWF9 115 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 CENPVL3A0A0U1RRI6 287 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 A0A1W2PRD5 423 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 A0A1W2PRF3 423 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 A0A1W2PRM7 423 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 DNAJC9-AS1A6NH13 148 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 SPRY1O43609 319 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 XPNPEP2O43895 674 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 NOS1APO75052 506 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 SNU13P55769 128 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 ERVK11-1P61568 191 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 SLC34A1Q06495 639 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 IL24Q13007 206 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 IL18R1Q13478 541 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 TUSC1Q2TAM9 212 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 DEFB112Q30KQ8 113 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 GPR157Q5UAW9 335 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 USP43Q70EL4 1123 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 C8orf59Q8N0T1 100 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 ZFP41Q8N8Y5 198 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 OR5D18Q8NGL1 313 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 OR5AK2Q8NH90 309 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 GATAD2BQ8WXI9 593 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 RGP1Q92546 391 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 SDSLQ96GA7 329 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 JAM3Q9BX67 310 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 HES4Q9HCC6 221 aa12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 SIRT4Q9Y6E7 314 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-211ENST00000559850 A0A1W2PQ09 198 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 MEX3AA1L020 520 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 H0YAE9 185 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 TRIM77I1YAP6 450 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 ANGPTL7O43827 346 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 LALBAP00709 142 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 BCL3P20749 454 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 NPBWR2P48146 333 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 SOX2P48431 317 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 ATP1B3P54709 279 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 MTCP1P56278 107 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 UBA52P62987 128 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 BAMBIQ13145 260 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 KLRD1Q13241 179 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 RBMS3Q6XE24 437 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 UTS2BQ765I0 119 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 FAM185AQ8N0U4 392 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 PNKDQ8N490 385 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 Q8N7P7 452 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 OR4M1Q8NGD0 313 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 TSEN15Q8WW01 171 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 TAF15Q92804 592 aaKnown RBP eCLIP12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 C10orf35Q96D05 121 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 TMEM80Q96HE8 168 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 CEP19Q96LK0 163 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 OPALINQ96PE5 141 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 NKX3-1Q99801 234 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 COMMD4Q9H0A8 199 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 TNFRSF19Q9NS68 423 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 C19orf12Q9NSK7 152 aa12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 RBFOX1Q9NWB1 397 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 DIMT1Q9UNQ2 313 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-211ENST00000559850 IGHV1-69DA0A0B4J2H0 117 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 TMEM212A6NML5 194 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 IGHV1-69P01742 117 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 CCDC159P0C7I6 412 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 OCM2P0CE71 109 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms