RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 JAM3Q9BX67 310 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 FN3KRPQ9HA64 309 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 SPACA1Q9HBV2 294 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 ADGRL4Q9HBW9 690 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 CYB5R1Q9UHQ9 305 aa9.39□□□□□ -0.91
CARMIL3-202ENST00000559694 HMSDA8MTL9 139 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 DEGS1O15121 323 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 DXOO77932 396 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 TXNDC12O95881 172 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 NQO2P16083 231 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 SRSF6Q13247 344 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 C2orf76Q3KRA6 126 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 TMEM91Q6ZNR0 172 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 ASB5Q8WWX0 329 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 ESRP2Q9H6T0 727 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 EXOGQ9Y2C4 368 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF816-ZNF321PA0A0X1KG74 233 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 GLRA1P23415 457 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 MECP2P51608 486 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF239Q16600 458 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 UQCC3Q6UW78 93 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 LSRQ86X29 649 aaPredicted RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 CBLN2Q8IUK8 224 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 OR2Z1Q8NG97 314 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 OR56B2PQ8NGI1 322 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 TIMP4Q99727 224 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF705FA8MVS1 300 aaPredicted RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF732B4DXR9 585 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 SLC33A1O00400 549 aaPredicted RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 XRCC3O43542 346 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 TK1P04183 234 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF705DP0CH99 300 aaPredicted RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF705BP0CI00 300 aaPredicted RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 WDR38Q5JTN6 314 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 C11orf87Q6NUJ2 197 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 DEGS2Q6QHC5 323 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 PLXDC2Q6UX71 529 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 CXorf67Q86X51 503 aaPredicted RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 CMTM1Q8IZ96 169 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 OR1S2Q8NGQ3 325 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 MARVELD3Q96A59 401 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 RRNAD1Q96FB5 475 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 ENY2Q9NPA8 101 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 SEMA5BQ9P283 1151 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 FLVCR1Q9Y5Y0 555 aa9.38□□□□□ -0.91
CARMIL3-202ENST00000559694 A0A0G2JMM0 328 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 A0A1W2PPB8 328 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 A0A1W2PRS3 328 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 KIR3DP1A8MWS1 328 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 DCTN6O00399 190 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 CDC14BO60729 498 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 PTP4A3O75365 173 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 ZFPL1O95159 310 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 ZIC2O95409 532 aaPredicted RBP9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 IFNA1P01562 189 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 CD3EP07766 207 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 HOXD4P09016 255 aaPredicted RBP9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 ASAH2BP0C7U1 165 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 RPS4Y1P22090 263 aaKnown RBP9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 TAF9Q16594 264 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 HIST2H3PS2Q5TEC6 136 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 RAB39BQ96DA2 213 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 RAB22AQ9UL26 194 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 KCNMB2Q9Y691 235 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 LY6G6EA0A0G2JKS1 128 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 NMBP08949 121 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 Q6ZRG5 221 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 C1orf87Q8N0U7 546 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 RNF128Q8TEB7 428 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 BCO1Q9HAY6 547 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 RHOFQ9HBH0 211 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 ERRFI1Q9UJM3 462 aaPredicted RBP9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 U3KQA8 63 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 ESPL1Q14674 2120 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 NKX6-3A6NJ46 265 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 ANGPTL7O43827 346 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 IGF2P01344 180 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 CPN1P15169 458 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 CA6P23280 308 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 PTAFRP25105 342 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 DOC2BQ14184 412 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 LY6DQ14210 128 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 SEZ6L2Q6UXD5 910 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF610Q8N9Z0 462 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 TERB2Q8NHR7 220 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 OPN3Q9H1Y3 402 aaPredicted RBP9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF286AQ9HBT8 521 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 FBXO7Q9Y3I1 522 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 GBF1Q92538 1859 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 H3BMH7 237 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 OMGP23515 440 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 TAGLN2P37802 199 aaKnown RBP9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 LSM6P62312 80 aaKnown RBP9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 OR6S1Q8NH40 331 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 GLYATL2Q8WU03 294 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 C4orf45Q96LM5 186 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF75AQ96N20 296 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 USB1Q9BQ65 265 aaKnown RBP9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 OPN4Q9UHM6 478 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms