RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TPD52L2O43399 206 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 TMEM127O75204 238 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 IL1AP01583 271 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 SFTPBP07988 381 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 RAB3BP20337 219 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 OR3A4PP47883 348 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 NPBWR2P48146 333 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 PDLIM4P50479 330 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 ZMYND11Q15326 602 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 NHLRC3Q5JS37 347 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 SHEQ5VZ18 495 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 GLT8D1Q68CQ7 371 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 LRRC28Q86X40 367 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 MKXQ8IYA7 352 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 C1orf87Q8N0U7 546 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 OR51T1Q8NGJ9 327 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 OR6M1Q8NGM8 313 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 OR11L1Q8NGX0 322 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 OR51F2Q8NH61 342 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 ZNF671Q8TAW3 534 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 TBC1D15Q8TC07 691 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 LRRC29Q8WV35 223 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 RFT1Q96AA3 541 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 C12orf43Q96C57 262 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 NKX3-1Q99801 234 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 TMEM165Q9HC07 324 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 TREM2Q9NZC2 230 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 GHRLQ9UBU3 117 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 FBLN5Q9UBX5 448 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 ZNF222Q9UK12 451 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 ITGB1BP2Q9UKP3 347 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 WIPI2Q9Y4P8 454 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 NPTNQ9Y639 398 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 V9GY05 133 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 NAV3Q8IVL0 2385 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 IFITM5A6NNB3 132 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 CLDN25C9JDP6 229 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 AIPO00170 330 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 SPRY1O43609 319 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 CLEC2LP0C7M8 214 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 AMY2BP19961 511 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 MYL9P24844 172 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 RPS19P39019 145 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 OR10A3P58181 314 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 VBP1P61758 197 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 ZNF404Q494X3 552 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 TMEM155Q4W5P6 130 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 FAM201AQ5SY85 155 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 ATPAF1Q5TC12 328 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 ACP7Q6ZNF0 438 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 CLVS1Q8IUQ0 354 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 Q8IYB0 196 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 OR5D18Q8NGL1 313 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 ISOC1Q96CN7 298 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 CEP19Q96LK0 163 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 ZNF488Q96MN9 340 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 WDR13Q9H1Z4 485 aa12.4□□□□□ -0.42
SNRPA1-207ENST00000559309 PPIAL4EA0A075B759 164 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 IGHV4-30-2A0A087WSY4 118 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 A6NLC8 198 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 NOTOA8MTQ0 251 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 TMEM14DPA8MWL7 114 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 F5H0A9 414 aaPredicted RBP12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 PPIAL4DF5H284 164 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 C3orf80F5H4A9 247 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 H3BMQ9 156 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 LGALS8O00214 317 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 WNT9BO14905 357 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 AKR7A2O43488 359 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 ANGPTL7O43827 346 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 CDRT1O95170 752 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 PPIAL4FP0DN26 164 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 MUC1P15941 1255 aaPredicted RBP12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 HTR2CP28335 458 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 NR4A2P43354 598 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 LSM3P62310 102 aaKnown RBP12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 BTG1P62324 171 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 ZNF146Q15072 292 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 DGUOKQ16854 277 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 CLEC12BQ2HXU8 276 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 Q5PR19 223 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 STUMQ69YW2 141 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 JAGN1Q8N5M9 183 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 ANGPTL6Q8NI99 470 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 TNFAIP8L1Q8WVP5 186 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 FAM168AQ92567 244 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 SLAMF9Q96A28 289 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 SLC25A46Q96AG3 418 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 HMG20AQ9NP66 347 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 KAAG1Q9UBP8 84 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 PPIAL4AQ9Y536 164 aa12.39□□□□□ -0.43
SNRPA1-207ENST00000559309 MAP1AP78559 2803 aaPredicted RBP12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 IGKV1D-17A0A075B6S4 117 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 SMIM31A0A1B0GVY4 71 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 OOEPA6NGQ2 149 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 A6NHS1 94 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 ZNF780AO75290 641 aaPredicted RBP12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 OCMP0CE72 109 aaPredicted RBP12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 UBBP0CG47 229 aa12.38□□□□□ -0.43
SNRPA1-207ENST00000559309 VSIG8P0DPA2 414 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms