RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 MRPS34P82930 218 aaKnown RBP14.43□□□□□ -0.1
SPG11-215ENST00000559193 PDZK1IP1Q13113 114 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 RSU1Q15404 277 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 FAM27BQ5VT28 67 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 SHEQ5VZ18 495 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 DYRK2Q92630 601 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 TOMM40LQ969M1 308 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 WDR54Q9H977 334 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 DKKL1Q9UK85 242 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 OR8U9P0C7N5 309 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 F2RL1P55085 397 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 SP6Q3SY56 376 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 DHRS11Q6UWP2 260 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 OR8U1Q8NH10 309 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 NTNG2Q96CW9 530 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 BSCL2Q96G97 398 aaPredicted RBP14.43□□□□□ -0.1
SPG11-215ENST00000559193 MARS2Q96GW9 593 aaKnown RBP14.43□□□□□ -0.1
SPG11-215ENST00000559193 REEP6Q96HR9 211 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 IMMP1LQ96LU5 166 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 SULT4A1Q9BR01 284 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 ESRP2Q9H6T0 727 aaKnown RBP14.43□□□□□ -0.1
SPG11-215ENST00000559193 HSF4Q9ULV5 492 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 CACNA1EQ15878 2313 aa14.43□□□□□ -0.1
SPG11-215ENST00000559193 SYNGR3O43761 229 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 CRYBA1P05813 215 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 COX6A1P12074 109 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 CHATP28329 748 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 AKR1D1P51857 326 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 TMEM187Q14656 261 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 RAB35Q15286 201 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 CLEC9AQ6UXN8 241 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 SAP25Q8TEE9 199 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 CMSS1Q9BQ75 279 aaKnown RBP14.42□□□□□ -0.1
SPG11-215ENST00000559193 NECAP2Q9NVZ3 263 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 ZNF850A8MQ14 1090 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 SGCEO43556 437 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 MBPP02686 304 aaPredicted RBP14.42□□□□□ -0.1
SPG11-215ENST00000559193 SPP1P10451 314 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 ZNF774Q6NX45 483 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 TDHQ8IZJ6 230 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 LYPD6BQ8NI32 183 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 GLYATL2Q8WU03 294 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 INTS12Q96CB8 462 aaKnown RBP14.42□□□□□ -0.1
SPG11-215ENST00000559193 NAA60Q9H7X0 242 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 SH2D2AQ9NP31 389 aa14.42□□□□□ -0.1
SPG11-215ENST00000559193 TERTO14746 1132 aaKnown RBP14.41□□□□□ -0.1
SPG11-215ENST00000559193 OR5AC1P0C628 307 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 ZNF728P0DKX0 622 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 DTYMKP23919 212 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 FAM3AP98173 230 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 DMBX1Q8NFW5 382 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 KIRREL1Q96J84 757 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 NXT1Q9UKK6 140 aaKnown RBP14.41□□□□□ -0.1
SPG11-215ENST00000559193 ARID1AO14497 2285 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 ZNF98A6NK75 572 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 FGF5P12034 268 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 NTF4P34130 210 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 DVL1P1P54792 670 aaPredicted RBP14.41□□□□□ -0.1
SPG11-215ENST00000559193 AVPI1Q5T686 147 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 TSPO2Q5TGU0 170 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 UBAC2Q8NBM4 344 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 GALNT14Q96FL9 552 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 PARP12Q9H0J9 701 aaKnown RBP14.41□□□□□ -0.1
SPG11-215ENST00000559193 ZNF700Q9H0M5 742 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 PLEKHA2Q9HB19 425 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 POMT1Q9Y6A1 747 aa14.41□□□□□ -0.1
SPG11-215ENST00000559193 IGKV1-12A0A0C4DH73 117 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 IGKV1D-12P01611 117 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 SSR4P51571 173 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 FXYD4P59646 89 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 CNN3Q15417 329 aaKnown RBP14.4□□□□□ -0.1
SPG11-215ENST00000559193 PIGYQ3MUY2 71 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 FAM76BQ5HYJ3 339 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 BRICD5Q6PL45 260 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 ASCL4Q6XD76 172 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 GPR137CQ8N3F9 429 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 RTN4IP1Q8WWV3 396 aaPredicted RBP14.4□□□□□ -0.1
SPG11-215ENST00000559193 ARV1Q9H2C2 271 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 PTRH2Q9Y3E5 179 aaKnown RBP14.4□□□□□ -0.1
SPG11-215ENST00000559193 HS3ST3B1Q9Y662 390 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 CXCL12P48061 93 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 RAC1P63000 192 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 ETV3LQ6ZN32 361 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 NAXEQ8NCW5 288 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 OR10AD1Q8NGE0 317 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 OR1F12Q8NHA8 337 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 WFDC1Q9HC57 220 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 BIN3Q9NQY0 253 aa14.4□□□□□ -0.1
SPG11-215ENST00000559193 FAM221AA4D161 298 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 COLCA2A8K830 154 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 E5RGE8 158 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 MASP2O00187 686 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 GEMIN2O14893 280 aaKnown RBP14.39□□□□□ -0.11
SPG11-215ENST00000559193 RBP2P50120 134 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 PEA15Q15121 130 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 EXT1Q16394 746 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 SWI5Q1ZZU3 235 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 ABCA11PQ4W5N1 156 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 LYZL2Q7Z4W2 148 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 C2CD4CQ8TF44 421 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms