RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 DOK2O60496 412 aa13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 RPS27P42677 84 aaKnown RBP13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 PPP5CP53041 499 aa13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 HNRNPA0Q13151 305 aaKnown RBP13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 Q499Y3 187 aa13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 CD276Q5ZPR3 534 aa13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 DCXRQ7Z4W1 244 aa13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 CATSPERDQ86XM0 798 aa13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 RGP1Q92546 391 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 DYRK2Q92630 601 aa13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 PDCD1LG2Q9BQ51 273 aa13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 STARD10Q9Y365 291 aa13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 SOX21Q9Y651 276 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 LHFPL6Q9Y693 200 aa13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 R4GMQ9 66 aa13.34□□□□□ -0.27
CDC42BPB-203ENST00000558867 DOCK11Q5JSL3 2073 aa13.33□□□□□ -0.27
CDC42BPB-203ENST00000558867 P2RY10O00398 339 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 SGCEO43556 437 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 ENSAO43768 121 aaKnown RBP13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 ISG15P05161 165 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 LIPFP07098 398 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 CLEC2LP0C7M8 214 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 SELEP16581 610 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 CALRP27797 417 aaKnown RBP13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 KIR3DL2P43630 455 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 FGF12P61328 243 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 HIST1H3AP68431 136 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 MXD1Q05195 221 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 INSL4Q14641 139 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 ZNF181Q2M3W8 571 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 HIST2H3PS2Q5TEC6 136 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 HIST2H3AQ71DI3 136 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 PRSS35Q8N3Z0 413 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 SLAMF6Q96DU3 332 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 MEGF10Q96KG7 1140 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 DERL3Q96Q80 235 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 TMEM246Q9BRR3 403 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 CHIAQ9BZP6 476 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 MOB1AQ9H8S9 216 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 TCF7L1Q9HCS4 588 aa13.33□□□□□ -0.28
CDC42BPB-203ENST00000558867 TRBV5-7A0A0A0MS05 114 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 ZNF878C9JN71 531 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 PSMD9O00233 223 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 RPP14O95059 124 aaKnown RBP13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 ZNF205O95201 554 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 CYB5R3P00387 301 aaPredicted RBP13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 NPY4RP50391 375 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 PPP3R1P63098 170 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 ENDOGQ14249 297 aaKnown RBP13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 KCNJ8Q15842 424 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 HSD17B12Q53GQ0 312 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 WDR38Q5JTN6 314 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 DDI2Q5TDH0 399 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 ASPHD2Q6ICH7 369 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 MZT2AQ6P582 158 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 DCDC5Q6ZRR9 648 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 OR5AS1Q8N127 324 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 OR8G5Q8NG78 346 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 OR2AJ1Q8NGZ0 328 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 GPR148Q8TDV2 347 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 PCGF1Q9BSM1 259 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 PPIL3Q9H2H8 161 aaKnown RBP13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 ASH2LQ9UBL3 628 aa13.32□□□□□ -0.28
CDC42BPB-203ENST00000558867 ACOD1A6NK06 481 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 LOC110117498-PIK3R3F6TDL0 507 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 CTDSP2O14595 271 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 PDCD5O14737 125 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 MELTFP08582 738 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 H2BFMP0C1H6 154 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 RAB3BP20337 219 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 PTBP1P26599 531 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 C2orf68Q2NKX9 166 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 FBLN7Q53RD9 439 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 SPANXN2Q5MJ10 180 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 WDR25Q64LD2 544 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 ZNF676Q8N7Q3 588 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 OR13C5Q8NGS8 318 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 OR11L1Q8NGX0 322 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 ERGIC1Q969X5 290 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 DACT3Q96B18 629 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 OR14A2Q96R54 314 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 ATF6BQ99941 703 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 POFUT1Q9H488 388 aa13.31□□□□□ -0.28
CDC42BPB-203ENST00000558867 NOTOA8MTQ0 251 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 TNFRSF13BO14836 293 aaPredicted RBP13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 PIN1P1O15428 100 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 TOX4O94842 621 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 ALX3O95076 343 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 UBCP0CG48 685 aaKnown RBP13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 SRMP19623 302 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 TNFSF8P32971 234 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 PSMA6P60900 246 aaKnown RBP13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 GRB2P62993 217 aaKnown RBP13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 RELBQ01201 579 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 FAM27D1Q5T7N8 215 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 TMEM244Q5VVB8 128 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 SFXN4Q6P4A7 337 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 METAP1DQ6UB28 335 aaPredicted RBP13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 FBXW12Q6X9E4 464 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 MOGAT3Q86VF5 341 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms