RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 MARVELD1Q9BSK0 173 aa2.56□□□□□ -2
CASC4-206ENST00000558847 SHCBP1LQ9BZQ2 653 aa2.56□□□□□ -2
CASC4-206ENST00000558847 CHRNA10Q9GZZ6 450 aa2.56□□□□□ -2
CASC4-206ENST00000558847 SDHAF3Q9NRP4 125 aa2.56□□□□□ -2
CASC4-206ENST00000558847 RBM22Q9NW64 420 aaKnown RBP eCLIP2.56□□□□□ -2
CASC4-206ENST00000558847 IGKV6-21A0A0C4DH24 114 aa2.55□□□□□ -2
CASC4-206ENST00000558847 PRAMEF26H0Y7S4 382 aa2.55□□□□□ -2
CASC4-206ENST00000558847 RPL36A-HNRNPH2H7BZ11 118 aa2.55□□□□□ -2
CASC4-206ENST00000558847 K7EN84 100 aa2.55□□□□□ -2
CASC4-206ENST00000558847 PLPP3O14495 311 aa2.55□□□□□ -2
CASC4-206ENST00000558847 SLC37A4O43826 429 aa2.55□□□□□ -2
CASC4-206ENST00000558847 CDRT1O95170 752 aa2.55□□□□□ -2
CASC4-206ENST00000558847 FADS2O95864 444 aaKnown RBP2.55□□□□□ -2
CASC4-206ENST00000558847 LHBP01229 141 aa2.55□□□□□ -2
CASC4-206ENST00000558847 CD8AP01732 235 aa2.55□□□□□ -2
CASC4-206ENST00000558847 IDH2P48735 452 aaKnown RBP2.55□□□□□ -2
CASC4-206ENST00000558847 C2orf80Q0P641 193 aa2.55□□□□□ -2
CASC4-206ENST00000558847 MOBPQ13875 183 aa2.55□□□□□ -2
CASC4-206ENST00000558847 SHHQ15465 462 aa2.55□□□□□ -2
CASC4-206ENST00000558847 TNXAQ16473 311 aa2.55□□□□□ -2
CASC4-206ENST00000558847 CLEC12AQ5QGZ9 265 aa2.55□□□□□ -2
CASC4-206ENST00000558847 DNLZQ5SXM8 178 aa2.55□□□□□ -2
CASC4-206ENST00000558847 MED27Q6P2C8 311 aa2.55□□□□□ -2
CASC4-206ENST00000558847 OSR2Q8N2R0 312 aa2.55□□□□□ -2
CASC4-206ENST00000558847 TCAIMQ8N3R3 496 aa2.55□□□□□ -2
CASC4-206ENST00000558847 CCNYL1Q8N7R7 359 aa2.55□□□□□ -2
CASC4-206ENST00000558847 OR8G5Q8NG78 346 aa2.55□□□□□ -2
CASC4-206ENST00000558847 OR8A1Q8NGG7 326 aa2.55□□□□□ -2
CASC4-206ENST00000558847 OR4D6Q8NGJ1 314 aa2.55□□□□□ -2
CASC4-206ENST00000558847 YIPF5Q969M3 257 aa2.55□□□□□ -2
CASC4-206ENST00000558847 SMIM8Q96KF7 97 aa2.55□□□□□ -2
CASC4-206ENST00000558847 ZNF396Q96N95 335 aaPredicted RBP2.55□□□□□ -2
CASC4-206ENST00000558847 QKIQ96PU8 341 aaKnown RBP eCLIP2.55□□□□□ -27e-7■■■□□ 15.2
CASC4-206ENST00000558847 DIABLOQ9NR28 239 aa2.55□□□□□ -2
CASC4-206ENST00000558847 STX18Q9P2W9 335 aaKnown RBP2.55□□□□□ -2
CASC4-206ENST00000558847 HMGXB4Q9UGU5 601 aa2.55□□□□□ -2
CASC4-206ENST00000558847 LOC102724200A0A096LPH7 203 aaPredicted RBP2.54□□□□□ -2
CASC4-206ENST00000558847 HSBP1L1C9JCN9 74 aa2.54□□□□□ -2
CASC4-206ENST00000558847 hCG_2039718K7EN88 272 aa2.54□□□□□ -2
CASC4-206ENST00000558847 M0QX08 132 aa2.54□□□□□ -2
CASC4-206ENST00000558847 UPK1AO00322 258 aa2.54□□□□□ -2
CASC4-206ENST00000558847 CST4P01036 141 aa2.54□□□□□ -2
CASC4-206ENST00000558847 NTF3P20783 257 aa2.54□□□□□ -2
CASC4-206ENST00000558847 RPA3P35244 121 aaPredicted RBP2.54□□□□□ -2
CASC4-206ENST00000558847 GPR176Q14439 515 aa2.54□□□□□ -2
CASC4-206ENST00000558847 GUSBP1Q15486 140 aa2.54□□□□□ -2
CASC4-206ENST00000558847 MRPL2Q5T653 305 aaKnown RBP2.54□□□□□ -2
CASC4-206ENST00000558847 FAM104BQ5XKR9 115 aa2.54□□□□□ -2
CASC4-206ENST00000558847 SPINT4Q6UDR6 99 aa2.54□□□□□ -2
CASC4-206ENST00000558847 COPS6Q7L5N1 327 aa2.54□□□□□ -2
CASC4-206ENST00000558847 PDPNQ86YL7 162 aa2.54□□□□□ -2
CASC4-206ENST00000558847 ATPAF2Q8N5M1 289 aa2.54□□□□□ -2
CASC4-206ENST00000558847 OR5H2Q8NGV7 314 aa2.54□□□□□ -2
CASC4-206ENST00000558847 UBA3Q8TBC4 463 aa2.54□□□□□ -2
CASC4-206ENST00000558847 KLF14Q8TD94 323 aaPredicted RBP2.54□□□□□ -2
CASC4-206ENST00000558847 IFT81Q8WYA0 676 aa2.54□□□□□ -2
CASC4-206ENST00000558847 YIPF6Q96EC8 236 aa2.54□□□□□ -2
CASC4-206ENST00000558847 ZNF2Q9BSG1 426 aaPredicted RBP2.54□□□□□ -2
CASC4-206ENST00000558847 PRRG3Q9BZD7 231 aa2.54□□□□□ -2
CASC4-206ENST00000558847 DDIT4Q9NX09 232 aa2.54□□□□□ -2
CASC4-206ENST00000558847 PCM1Q15154 2024 aa2.54□□□□□ -2
CASC4-206ENST00000558847 USP42Q9H9J4 1324 aaKnown RBP2.53□□□□□ -2
CASC4-206ENST00000558847 KIR2DS1A0A191URI9 304 aa2.53□□□□□ -2
CASC4-206ENST00000558847 A0A1W2PQ67 120 aa2.53□□□□□ -2
CASC4-206ENST00000558847 ZNF98A6NK75 572 aa2.53□□□□□ -2
CASC4-206ENST00000558847 OR2AT4A6NND4 320 aa2.53□□□□□ -2
CASC4-206ENST00000558847 CD300LBA8K4G0 201 aa2.53□□□□□ -2
CASC4-206ENST00000558847 UBDO15205 165 aa2.53□□□□□ -2
CASC4-206ENST00000558847 OR2A4O95047 310 aa2.53□□□□□ -2
CASC4-206ENST00000558847 CDK1P06493 297 aa2.53□□□□□ -2
CASC4-206ENST00000558847 TTPAP49638 278 aa2.53□□□□□ -2
CASC4-206ENST00000558847 XKP51811 444 aa2.53□□□□□ -2
CASC4-206ENST00000558847 RAB38P57729 211 aa2.53□□□□□ -2
CASC4-206ENST00000558847 KCTD16Q68DU8 428 aa2.53□□□□□ -2
CASC4-206ENST00000558847 HBMQ6B0K9 141 aa2.53□□□□□ -2
CASC4-206ENST00000558847 ZFAND6Q6FIF0 208 aa2.53□□□□□ -2
CASC4-206ENST00000558847 SLC25A34Q6PIV7 304 aa2.53□□□□□ -2
CASC4-206ENST00000558847 IGFL1Q6UW32 110 aa2.53□□□□□ -2
CASC4-206ENST00000558847 SYCE1Q8N0S2 351 aa2.53□□□□□ -2
CASC4-206ENST00000558847 MIR7-3HGQ8N6C7 128 aa2.53□□□□□ -2
CASC4-206ENST00000558847 DRAXINQ8NBI3 349 aaPredicted RBP2.53□□□□□ -2
CASC4-206ENST00000558847 OR4K2Q8NGD2 314 aa2.53□□□□□ -2
CASC4-206ENST00000558847 NELFBQ8WX92 580 aa2.53□□□□□ -2
CASC4-206ENST00000558847 SPACA5Q96QH8 159 aa2.53□□□□□ -2
CASC4-206ENST00000558847 OR2A7Q96R45 310 aa2.53□□□□□ -2
CASC4-206ENST00000558847 SCRT1Q9BWW7 348 aa2.53□□□□□ -2
CASC4-206ENST00000558847 BEX2Q9BXY8 128 aa2.53□□□□□ -2
CASC4-206ENST00000558847 NXF2Q9GZY0 626 aaKnown RBP2.53□□□□□ -2
CASC4-206ENST00000558847 OR52A5Q9H2C5 316 aa2.53□□□□□ -2
CASC4-206ENST00000558847 PARP11Q9NR21 331 aa2.53□□□□□ -2
CASC4-206ENST00000558847 INSIG2Q9Y5U4 225 aa2.53□□□□□ -2
CASC4-206ENST00000558847 USH1CQ9Y6N9 552 aa2.53□□□□□ -2
CASC4-206ENST00000558847 DOCK8Q8NF50 2099 aa2.53□□□□□ -2.01
CASC4-206ENST00000558847 A0A1B0GW15 77 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 GMNCA6NCL1 334 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 CEACAM18A8MTB9 384 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 ENSAO43768 121 aaKnown RBP2.52□□□□□ -2.01
CASC4-206ENST00000558847 IGHV1-46P01743 117 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 RLN2P04090 185 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 TAC1P20366 129 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms