RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 S100A14Q9HCY8 104 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 AMBNQ9NP70 447 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 UBAP1Q9NZ09 502 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 KIAA1456Q9P272 454 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 MRM2Q9UI43 246 aaKnown RBP3.52□□□□□ -1.85
SPG11-211ENST00000558561 RHBDD3Q9Y3P4 386 aa3.52□□□□□ -1.85
SPG11-211ENST00000558561 LOC105371242A0A075B767 164 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 A0A1B0GTI1 187 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 ANKRD61A6NGH8 418 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 RIIAD1A6NNX1 92 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 ZNF850A8MQ14 1090 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 IQCF6A8MYZ5 107 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 E9PI62 339 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 TMEM178BH3BS89 294 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 EI24O14681 340 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 ENTPD6O75354 484 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 SRSF10O75494 262 aaKnown RBP3.51□□□□□ -1.85
SPG11-211ENST00000558561 ATP5HO75947 161 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 BAG2O95816 211 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 IGHV2-70P01814 119 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 IGHV2-5P01817 119 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 HMGN1P05114 100 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 CD55P08174 381 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 WNT2P09544 360 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 SELLP14151 372 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 GABRB1P18505 474 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 ACHEP22303 614 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 CD80P33681 288 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 CX3CR1P49238 355 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 ARHGDIAP52565 204 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 RAD23AP54725 363 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 RIPPLY3P57055 190 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 DSCR9P59020 149 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 CSNK2BP67870 215 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 PPP2R2BQ00005 443 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 ZNF85Q03923 595 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 TAF13Q15543 124 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 LRRC36Q1X8D7 754 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 ODF4Q2M2E3 257 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 KIAA2026Q5HYC2 2103 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 KLF17Q5JT82 389 aaPredicted RBP3.51□□□□□ -1.85
SPG11-211ENST00000558561 FAHD2BQ6P2I3 314 aaPredicted RBP3.51□□□□□ -1.85
SPG11-211ENST00000558561 DNM1P34Q6PK57 102 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 METAP1DQ6UB28 335 aaPredicted RBP3.51□□□□□ -1.85
SPG11-211ENST00000558561 ZNF841Q6ZN19 808 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 CCDC121Q6ZUS5 278 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 DPPA2Q7Z7J5 298 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 LRRC28Q86X40 367 aaPredicted RBP3.51□□□□□ -1.85
SPG11-211ENST00000558561 CBR4Q8N4T8 237 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 NEXN-AS1Q8NBZ9 246 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 OR8B12Q8NGG6 310 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 OR56B2PQ8NGI1 322 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 OR51G2Q8NGK0 314 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 OTOSQ8NHW6 89 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 RNF133Q8WVZ7 376 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 PIGCQ92535 297 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 RPL3LQ92901 407 aaKnown RBP3.51□□□□□ -1.85
SPG11-211ENST00000558561 NRBF2Q96F24 287 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 FAHD2AQ96GK7 314 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 CENPNQ96H22 339 aaPredicted RBP3.51□□□□□ -1.85
SPG11-211ENST00000558561 ZNF488Q96MN9 340 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 ZNF582Q96NG8 517 aaPredicted RBP3.51□□□□□ -1.85
SPG11-211ENST00000558561 TMEM246Q9BRR3 403 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 ZNF649Q9BS31 505 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 COPS4Q9BT78 406 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 WACQ9BTA9 647 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 HDHD2Q9H0R4 259 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 WDR13Q9H1Z4 485 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 ADGRL4Q9HBW9 690 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 PCDHB16Q9NRJ7 776 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 KRT84Q9NSB2 600 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 DDX28Q9NUL7 540 aaKnown RBP3.51□□□□□ -1.85
SPG11-211ENST00000558561 TMEM106BQ9NUM4 274 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 TMEM100Q9NV29 134 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 HIF1ANQ9NWT6 349 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 PPP1R14DQ9NXH3 145 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 NKIRAS2Q9NYR9 191 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 OPN4Q9UHM6 478 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 BAIAP2Q9UQB8 552 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 LRP12Q9Y561 859 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 NPTNQ9Y639 398 aa3.51□□□□□ -1.85
SPG11-211ENST00000558561 COL6A5A8TX70 2615 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 hCG_38984A0A1B0GV85 526 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 A0A1B0GWJ7 208 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 A0A1W2PQL4 384 aaPredicted RBP3.5□□□□□ -1.85
SPG11-211ENST00000558561 PLSCR5A0PG75 271 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 MEX3AA1L020 520 aaKnown RBP3.5□□□□□ -1.85
SPG11-211ENST00000558561 ISPDA4D126 451 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 ARRDC5A6NEK1 342 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 GGT3PA6NGU5 568 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 F8VVB4 439 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 F8VWA3 439 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.5□□□□□ -1.85
SPG11-211ENST00000558561 NDUFS8O00217 210 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 P2RY10O00398 339 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 CDIPTO14735 213 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 RHBDL1O75783 438 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 RGS11O94810 467 aa3.5□□□□□ -1.85
SPG11-211ENST00000558561 RPP14O95059 124 aaKnown RBP3.5□□□□□ -1.85
SPG11-211ENST00000558561 VENTXO95231 258 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms