RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 MTCH1Q9NZJ7 389 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 RABL2AQ9UBK7 228 aaPredicted RBP14.28□□□□□ -0.12
SNX1-203ENST00000558040 EXTL2Q9UBQ6 330 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 RABL2BQ9UNT1 228 aa14.28□□□□□ -0.12
SNX1-203ENST00000558040 A0A0A6YYH2 397 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 A6NJ64 397 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 NOS1APO75052 506 aaPredicted RBP14.27□□□□□ -0.13
SNX1-203ENST00000558040 RHBDL1O75783 438 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 PGA5P0DJD9 388 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 BCL3P20749 454 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 CPT2P23786 658 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 ETV6P41212 452 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 EFNB2P52799 333 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 RPS27AP62979 156 aaKnown RBP14.27□□□□□ -0.13
SNX1-203ENST00000558040 CCL8P80075 99 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 ZNF45Q02386 682 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 MPPED2Q15777 294 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 C11orf71Q6IPW1 123 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 RAB12Q6IQ22 244 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 METAP1DQ6UB28 335 aaPredicted RBP14.27□□□□□ -0.13
SNX1-203ENST00000558040 WDR82Q6UXN9 313 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 C20orf204Q6ZNR8 217 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 MOGAT3Q86VF5 341 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 C11orf53Q8IXP5 236 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 POC1AQ8NBT0 407 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 TMEM104Q8NE00 496 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 Q8NFD4 153 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 OR10Z1Q8NGY1 313 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 POM121Q96HA1 1249 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 VRK1Q99986 396 aaPredicted RBP14.27□□□□□ -0.13
SNX1-203ENST00000558040 TRAF4Q9BUZ4 470 aaPredicted RBP14.27□□□□□ -0.13
SNX1-203ENST00000558040 SELENOIQ9C0D9 397 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 WDR12Q9GZL7 423 aaKnown RBP14.27□□□□□ -0.13
SNX1-203ENST00000558040 RAB1BQ9H0U4 201 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 AKIP1Q9NQ31 210 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 MYO18BQ8IUG5 2567 aa14.27□□□□□ -0.13
SNX1-203ENST00000558040 A0A1W2PP11 408 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 FABP12A6NFH5 140 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 CLDN25C9JDP6 229 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 SFTPBP07988 381 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 CHRM2P08172 466 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 SOD3P08294 240 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 IRF2P14316 349 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 CFHR2P36980 270 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 NPBWR2P48146 333 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 FGF12P61328 243 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 PLA2G7Q13093 441 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 ZNF846Q147U1 533 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 FIP1L1Q6UN15 594 aaKnown RBP14.26□□□□□ -0.13
SNX1-203ENST00000558040 FAM131AQ6UXB0 335 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 OR56B1Q8NGI3 324 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 OR51T1Q8NGJ9 327 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 Q8TCH9 128 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 HPS1Q92902 700 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 EMG1Q92979 244 aaKnown RBP14.26□□□□□ -0.13
SNX1-203ENST00000558040 NRIP2Q9BQI9 281 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 TM2D1Q9BX74 207 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 LPAR5Q9H1C0 372 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 RBFOX1Q9NWB1 397 aaKnown RBP14.26□□□□□ -0.13
SNX1-203ENST00000558040 PPP1R3CQ9UQK1 317 aa14.26□□□□□ -0.13
SNX1-203ENST00000558040 ADGRG4Q8IZF6 3080 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 LRRC30A6NM36 301 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 IFNL4K9M1U5 179 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 AKR7A2O43488 359 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 TPPPO94811 219 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 NXPH2O95156 264 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 CD8AP01732 235 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 PTBP1P26599 531 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNX1-203ENST00000558040 NR4A2P43354 598 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 PITPNBP48739 271 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 RBM11P57052 281 aaKnown RBP14.25□□□□□ -0.13
SNX1-203ENST00000558040 ERVK11-1P61568 191 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 NHLRC3Q5JS37 347 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 TMEM69Q5SWH9 247 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 ZNF826PQ6ZT77 177 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 LINC00596Q86U02 117 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 FAM58AQ8N1B3 248 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 ZCCHC24Q8N2G6 241 aaKnown RBP14.25□□□□□ -0.13
SNX1-203ENST00000558040 OR4M1Q8NGD0 313 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 C15orf40Q8WUR7 153 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 LRRC29Q8WV35 223 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 C14orf79Q96F83 325 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 Q96M66 194 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 GAL3ST1Q99999 423 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 NUDT16L1Q9BRJ7 211 aaKnown RBP14.25□□□□□ -0.13
SNX1-203ENST00000558040 GCM1Q9NP62 436 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 RASL12Q9NYN1 266 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 LAMP3Q9UQV4 416 aa14.25□□□□□ -0.13
SNX1-203ENST00000558040 USP9XQ93008 2570 aaPredicted RBP14.25□□□□□ -0.13
SNX1-203ENST00000558040 H3BUI4 141 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 XRCC3O43542 346 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 PRKACAP17612 351 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 GLRA1P23415 457 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 CDK2P24941 298 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 PITPNAQ00169 270 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 IL18Q14116 193 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 SPRNQ5BIV9 151 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 MFSD4AQ8N468 514 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 ZNF488Q96MN9 340 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 CACNG6Q9BXT2 260 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms