RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 E2F6O75461 281 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 NXPH2O95156 264 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 MPZP25189 248 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 RIDAP52758 137 aaKnown RBP12.87□□□□□ -0.35
SCFD1-224ENST00000557713 SNAPC1Q16533 368 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 NSUN5P1Q3KNT7 163 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 Q6ZSR3 168 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 AQP12AQ8IXF9 295 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 OR14K1Q8NGZ2 314 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 CCDC124Q96CT7 223 aaKnown RBP12.87□□□□□ -0.35
SCFD1-224ENST00000557713 MALSU1Q96EH3 234 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 TEX12Q9BXU0 123 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 TTTY10Q9BZA0 68 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 WNT10AQ9GZT5 417 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 MMP28Q9H239 520 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 TVP23BQ9NYZ1 205 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 POLDIP2Q9Y2S7 368 aa12.87□□□□□ -0.35
SCFD1-224ENST00000557713 TBL2Q9Y4P3 447 aaKnown RBP12.87□□□□□ -0.35
SCFD1-224ENST00000557713 K7N7A8 449 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 PIN1P1O15428 100 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 PIPP12273 146 aaPredicted RBP12.86□□□□□ -0.35
SCFD1-224ENST00000557713 CALB2P22676 271 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 CNN3Q15417 329 aaKnown RBP12.86□□□□□ -0.35
SCFD1-224ENST00000557713 PLA1AQ53H76 456 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 ZNF626Q68DY1 528 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 ASRGL1Q7L266 308 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 NDUFA11Q86Y39 141 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 ELMOD2Q8IZ81 293 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 BATF2Q8N1L9 274 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 OR4S1Q8NGB4 309 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 OR11H6Q8NGC7 330 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 APOL4Q9BPW4 351 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 OR14J1Q9UGF5 321 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 IKZF2Q9UKS7 526 aa12.86□□□□□ -0.35
SCFD1-224ENST00000557713 MAGEB4O15481 346 aaPredicted RBP12.85□□□□□ -0.35
SCFD1-224ENST00000557713 ZNF737O75373 536 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 RBP4P02753 201 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 ARG1P05089 322 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 ZNF728P0DKX0 622 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 HOXB6P17509 224 aaKnown RBP12.85□□□□□ -0.35
SCFD1-224ENST00000557713 DYNLT3P51808 116 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 CRISP1P54107 249 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 COL10A1Q03692 680 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 SSX2Q16385 188 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 ZNF322Q6U7Q0 402 aaPredicted RBP12.85□□□□□ -0.35
SCFD1-224ENST00000557713 ANGPTL5Q86XS5 388 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 TMEM219Q86XT9 240 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 OR13D1Q8NGV5 346 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 RPS4Y2Q8TD47 263 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 FOXRED1Q96CU9 486 aaPredicted RBP12.85□□□□□ -0.35
SCFD1-224ENST00000557713 R3HDM4Q96D70 268 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 CITED2Q99967 270 aaPredicted RBP12.85□□□□□ -0.35
SCFD1-224ENST00000557713 PKIBQ9C010 78 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 PRSS22Q9GZN4 317 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 MOB1AQ9H8S9 216 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 DNAJB9Q9UBS3 223 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 PITPNC1Q9UKF7 332 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 R4GMQ9 66 aa12.85□□□□□ -0.35
SCFD1-224ENST00000557713 A6NIN4 97 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 DHRS7CA6NNS2 312 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 LOC110117498-PIK3R3F6TDL0 507 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 ALX3O95076 343 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 IGHV1-8P0DP01 117 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 LOXL3P58215 753 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 CXCR4P61073 352 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 ESRRGP62508 458 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 EFNB1P98172 346 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 IL24Q13007 206 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 Q6ZS46 218 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 MEPCEQ7L2J0 689 aaKnown RBP12.84□□□□□ -0.35
SCFD1-224ENST00000557713 OR4F17Q8NGA8 305 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 MRAPQ8TCY5 172 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 OR4F4Q96R69 305 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 CNN2Q99439 309 aaKnown RBP12.84□□□□□ -0.35
SCFD1-224ENST00000557713 ABCB10Q9NRK6 738 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 NECAP2Q9NVZ3 263 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 OR52A1Q9UKL2 312 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 GTF2A1LQ9UNN4 478 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 SLC22A13Q9Y226 551 aa12.84□□□□□ -0.35
SCFD1-224ENST00000557713 MEX3AA1L020 520 aaKnown RBP12.83□□□□□ -0.36
SCFD1-224ENST00000557713 F8VVB4 439 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 F8VWA3 439 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 PRKYO43930 277 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 CHRM2P08172 466 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 ACTR3P61158 418 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 BLCAPP62952 87 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 PTGES3Q15185 160 aaKnown RBP12.83□□□□□ -0.36
SCFD1-224ENST00000557713 BCL2L15Q5TBC7 163 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 BCDIN3DQ7Z5W3 292 aaKnown RBP12.83□□□□□ -0.36
SCFD1-224ENST00000557713 ASCC1Q8N9N2 400 aaKnown RBP12.83□□□□□ -0.36
SCFD1-224ENST00000557713 DNAJC9Q8WXX5 260 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 SGCDQ92629 289 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 MNTQ99583 582 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 THTPAQ9BU02 230 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 AURKAIP1Q9NWT8 199 aaPredicted RBP12.83□□□□□ -0.36
SCFD1-224ENST00000557713 MTCH1Q9NZJ7 389 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 MRM2Q9UI43 246 aaKnown RBP12.83□□□□□ -0.36
SCFD1-224ENST00000557713 SNX5Q9Y5X3 404 aa12.83□□□□□ -0.36
SCFD1-224ENST00000557713 JUNBP17275 347 aaPredicted RBP12.82□□□□□ -0.36
SCFD1-224ENST00000557713 CCL1P22362 96 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms