RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TMEM186Q96B77 213 aa11.44□□□□□ -0.58
SHMT2-234ENST00000557703 FOXRED1Q96CU9 486 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-234ENST00000557703 DERL3Q96Q80 235 aa11.44□□□□□ -0.58
SHMT2-234ENST00000557703 NR1H4Q96RI1 486 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-234ENST00000557703 SSBP3Q9BWW4 388 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-234ENST00000557703 LPAR3Q9UBY5 353 aa11.44□□□□□ -0.58
SHMT2-234ENST00000557703 CLN8Q9UBY8 286 aa11.44□□□□□ -0.58
SHMT2-234ENST00000557703 GLS2Q9UI32 602 aa11.44□□□□□ -0.58
SHMT2-234ENST00000557703 IGKV1-27A0A075B6S5 117 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 A0A087WXM4 84 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 NKX6-3A6NJ46 265 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 OR2AT4A6NND4 320 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 H3BSH0 61 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-234ENST00000557703 AKR7A2O43488 359 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 ZNF780AO75290 641 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-234ENST00000557703 RHBDL1O75783 438 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 NXPH2O95156 264 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 PITPNBP48739 271 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 PSMD7P51665 324 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 GNB2P62879 340 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 KRTAP1-1Q07627 177 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 GPR176Q14439 515 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 ARMCX4Q5H9R4 360 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 SPIN3Q5JUX0 258 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 LIPKQ5VXJ0 399 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 STUMQ69YW2 141 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 SFRP4Q6FHJ7 346 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-234ENST00000557703 ACP7Q6ZNF0 438 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 SLC25A26Q70HW3 274 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 ZFP41Q8N8Y5 198 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 MAPK1IP1LQ8NDC0 245 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 ANGPTL6Q8NI99 470 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 POM121Q96HA1 1249 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 OR14A2Q96R54 314 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 UQCC2Q9BRT2 126 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 SLITRK2Q9H156 845 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 NARFLQ9H6Q4 476 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 TCF7L1Q9HCS4 588 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 GHRLQ9UBU3 117 aa11.43□□□□□ -0.58
SHMT2-234ENST00000557703 A0A0G2JMP0 313 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 A0A0X1KG70 313 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 H3BUI4 141 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 CCRL2O00421 344 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 TMPRSS2O15393 492 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 ADAM20O43506 726 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 KDM4BO94953 1096 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 UCHL1P09936 223 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 PPIAL4GP0DN37 164 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 HNF1AP20823 631 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 IL2RGP31785 369 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 ZNF93P35789 620 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-234ENST00000557703 CAV3P56539 151 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 IL13RA1P78552 427 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 ZNF146Q15072 292 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 LRRC10Q5BKY1 277 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 SYT6Q5T7P8 510 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-234ENST00000557703 ELP2Q6IA86 826 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 ASCL4Q6XD76 172 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 ZNF788Q6ZQV5 615 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 ANGPTL5Q86XS5 388 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 ZNF561Q8N587 486 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 BOLLQ8N9W6 283 aaKnown RBP11.42□□□□□ -0.58
SHMT2-234ENST00000557703 DEFB108BQ8NET1 73 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 Q8NFD4 153 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 OR4M2Q8NGB6 313 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 TBC1D15Q8TC07 691 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 NPRL2Q8WTW4 380 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 SDSLQ96GA7 329 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 GPER1Q99527 375 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 FAM234AQ9H0X4 552 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 METTL17Q9H7H0 456 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-234ENST00000557703 ZNF696Q9H7X3 374 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 NDUFB11Q9NX14 153 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 IL36GQ9NZH8 169 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 MTCH1Q9NZJ7 389 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 OR5V1Q9UGF6 321 aa11.42□□□□□ -0.58
SHMT2-234ENST00000557703 NIPBLQ6KC79 2804 aaeCLIP11.42□□□□□ -0.58
SHMT2-234ENST00000557703 PNMA8CA0A1B0GUJ8 204 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 FAM157AC9JC47 383 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 SIGLEC5O15389 551 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 NDUFB3O43676 98 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 SYNGR1O43759 233 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 GYPAP02724 150 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 CD37P11049 281 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 PSG2P11465 335 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 EGR1P18146 543 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 SRMP19623 302 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 CD80P33681 288 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 PTGFRP43088 359 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 MAP2K4P45985 399 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 ZP1P60852 638 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 HSD17B12Q53GQ0 312 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 FAM201AQ5SY85 155 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 DDI2Q5TDH0 399 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 WDR25Q64LD2 544 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-234ENST00000557703 CD200R1LQ6Q8B3 271 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 ZNF841Q6ZN19 808 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 CEACAM19Q7Z692 300 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 FAM58AQ8N1B3 248 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms