RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 RAB31Q13636 194 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 SPCS2Q15005 226 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 TMEM183BQ1AE95 376 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 TMEM176BQ3YBM2 270 aaPredicted RBP2.2□□□□□ -2.06
TRAV28-201ENST00000557548 CHRFAM7AQ494W8 412 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 ZCWPW2Q504Y3 356 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 TFDP3Q5H9I0 405 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 ACTL10Q5JWF8 245 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 TIMM23BQ5SRD1 257 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 HES5Q5TA89 166 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 FAM45BPQ6NSW5 357 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 NIPAL1Q6NVV3 410 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 ZNF530Q6P9A1 599 aaPredicted RBP2.2□□□□□ -2.06
TRAV28-201ENST00000557548 DRAM2Q6UX65 266 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 FBXW12Q6X9E4 464 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 CAMK2N1Q7Z7J9 78 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 P2RY8Q86VZ1 359 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 CALHM1Q8IU99 346 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 SLC30A8Q8IWU4 369 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 TMEM183AQ8IXX5 376 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 RIBC1Q8N443 379 aaPredicted RBP2.2□□□□□ -2.06
TRAV28-201ENST00000557548 FAM71E2Q8N5Q1 922 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 C2orf73Q8N5S3 287 aaPredicted RBP2.2□□□□□ -2.06
TRAV28-201ENST00000557548 METTL13Q8N6R0 699 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 C11orf72Q8NBR9 251 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 OR11H7Q8NGC8 314 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 LINC01006Q8NI28 216 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 PIGXQ8TBF5 258 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 FAM45AQ8TCE6 357 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 SFXN5Q8TD22 340 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 BLOC1S5Q8TDH9 187 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 NEK7Q8TDX7 302 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 TMEM234Q8WY98 164 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 TMEM158Q8WZ71 300 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 RGP1Q92546 391 aaPredicted RBP2.2□□□□□ -2.06
TRAV28-201ENST00000557548 PPWD1Q96BP3 646 aaKnown RBP2.2□□□□□ -2.06
TRAV28-201ENST00000557548 FLYWCH2Q96CP2 140 aaKnown RBP2.2□□□□□ -2.06
TRAV28-201ENST00000557548 SEH1LQ96EE3 360 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 WDR34Q96EX3 536 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 RNF185Q96GF1 192 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 BTN2A3PQ96KV6 586 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 Q96MT0 163 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 RILPQ96NA2 401 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 GABRG3Q99928 467 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 HDHD3Q9BSH5 251 aaPredicted RBP2.2□□□□□ -2.06
TRAV28-201ENST00000557548 OSBPL11Q9BXB4 747 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 ULBP1Q9BZM6 244 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 BCL2L14Q9BZR8 327 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 SLIRPQ9GZT3 109 aaKnown RBP2.2□□□□□ -2.06
TRAV28-201ENST00000557548 FAM107BQ9H098 131 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 SPNS1Q9H2V7 528 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 CDC42EP4Q9H3Q1 356 aaKnown RBP2.2□□□□□ -2.06
TRAV28-201ENST00000557548 MFSD1Q9H3U5 465 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 DSN1Q9H410 356 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 PARVBQ9HBI1 364 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 MYOZ1Q9NP98 299 aaPredicted RBP2.2□□□□□ -2.06
TRAV28-201ENST00000557548 C12orf4Q9NQ89 552 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 IFT46Q9NQC8 304 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 GID8Q9NWU2 228 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 NUFIP1Q9UHK0 495 aaKnown RBP2.2□□□□□ -2.06
TRAV28-201ENST00000557548 CYB5R1Q9UHQ9 305 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 CD84Q9UIB8 345 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 TP53TG5Q9Y2B4 290 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 ARL5AQ9Y689 179 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 ADGBQ8N7X0 1667 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 NOTCH2Q04721 2471 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 KIDINS220Q9ULH0 1771 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 MTUS2Q5JR59 1369 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 ABCA6Q8N139 1617 aa2.2□□□□□ -2.06
TRAV28-201ENST00000557548 ZNF532Q9HCE3 1301 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.19□□□□□ -2.06
TRAV28-201ENST00000557548 A0A1B0GV72 72 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 A0A1W2PRG6 482 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 OR2AT4A6NND4 320 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 C2orf74A8MZ97 194 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 TGOLN2O43493 480 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 SSNA1O43805 119 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 CTNSO60931 367 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 GLSO94925 669 aaPredicted RBP2.19□□□□□ -2.06
TRAV28-201ENST00000557548 GAS8-AS1O95177 125 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 MPZL1O95297 269 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 ATP6V1G2O95670 118 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 KRT75O95678 551 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 DHFRP00374 187 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 ISG15P05161 165 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 C8orf88P0DMB2 117 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 LIPCP11150 499 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 ZNF35P13682 527 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 CD36P16671 472 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 RCC1P18754 421 aaPredicted RBP2.19□□□□□ -2.06
TRAV28-201ENST00000557548 CELP19835 753 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 RAB3AP20336 220 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 PVALBP20472 110 aaPredicted RBP2.19□□□□□ -2.06
TRAV28-201ENST00000557548 GNRHRP30968 328 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 GGT2P36268 569 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 MYCNOSP40205 109 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 CXCL5P42830 114 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 NMUP48645 174 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 TAS2R39P59534 338 aa2.19□□□□□ -2.06
TRAV28-201ENST00000557548 GNB2P62879 340 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms