RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 UNKLQ9H9P5 680 aaKnown RBP14.24□□□□□ -0.13
SHMT2-232ENST00000557487 SPACA1Q9HBV2 294 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 KCNJ16Q9NPI9 418 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 MCTS1Q9ULC4 181 aaKnown RBP14.24□□□□□ -0.13
SHMT2-232ENST00000557487 LHX6Q9UPM6 363 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 KMT2EQ8IZD2 1858 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 SHISA8B8ZZ34 492 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 M0R036 132 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 ZFAND5O76080 213 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 UCP3P55916 312 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 PIGPP57054 158 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 CFHR1Q03591 330 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 ZNF616Q08AN1 781 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 LGI3Q8N145 548 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 CADM4Q8NFZ8 388 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 ERGIC1Q969X5 290 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 NAA11Q9BSU3 229 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-232ENST00000557487 EIF5A2Q9GZV4 153 aaKnown RBP14.23□□□□□ -0.13
SHMT2-232ENST00000557487 UMAD1C9J7I0 102 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 TOX3O15405 576 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-232ENST00000557487 GALR2O43603 387 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-232ENST00000557487 GLB1P16278 677 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 ACKR3P25106 362 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 CSNK1A1P48729 337 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 NXPH1P58417 271 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 LIAT1Q6ZQX7 453 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 Q6ZS52 159 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 C6orf201Q7Z4U5 140 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 TMEM54Q969K7 222 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 SPTSSAQ969W0 71 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 INTS12Q96CB8 462 aaKnown RBP14.23□□□□□ -0.13
SHMT2-232ENST00000557487 C18orf12Q96KH6 178 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 SMIM3Q9BZL3 60 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 ELL3Q9HB65 397 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-232ENST00000557487 GSN-AS1Q9NRJ2 163 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 PIGLQ9Y2B2 252 aa14.23□□□□□ -0.13
SHMT2-232ENST00000557487 IGKV1D-8A0A087WSZ0 117 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 A0A087WZY1 265 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 BTBD17A6NE02 478 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 AP4M1O00189 453 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 ST8SIA3O43173 380 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 PIAS2O75928 621 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 SCGB1D2O95969 90 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 IFNA17P01571 189 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 TMEM225BP0DP42 221 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 CHATP28329 748 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 ID4P47928 161 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 SRPXP78539 464 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 FABP9Q0Z7S8 132 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 AKIRIN2Q53H80 203 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 LRRC18Q8N456 261 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 FADS6Q8N9I5 356 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 CCDC71LQ8N9Z2 235 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 THAP3Q8WTV1 239 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-232ENST00000557487 RTN4IP1Q8WWV3 396 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-232ENST00000557487 RLN3Q8WXF3 142 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 LIN37Q96GY3 246 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-232ENST00000557487 PIGQQ9BRB3 760 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 TMED3Q9Y3Q3 217 aa14.22□□□□□ -0.13
SHMT2-232ENST00000557487 NME2P1O60361 137 aa14.21□□□□□ -0.13
SHMT2-232ENST00000557487 VAMP5O95183 116 aa14.21□□□□□ -0.13
SHMT2-232ENST00000557487 CYC1P08574 325 aa14.21□□□□□ -0.13
SHMT2-232ENST00000557487 FAHP16930 419 aa14.21□□□□□ -0.13
SHMT2-232ENST00000557487 EIF2S3P41091 472 aaKnown RBP14.21□□□□□ -0.13
SHMT2-232ENST00000557487 SULT1A1P50225 295 aa14.21□□□□□ -0.13
SHMT2-232ENST00000557487 CLINT1Q14677 625 aa14.21□□□□□ -0.13
SHMT2-232ENST00000557487 CNN3Q15417 329 aaKnown RBP14.21□□□□□ -0.13
SHMT2-232ENST00000557487 POM121Q96HA1 1249 aa14.21□□□□□ -0.13
SHMT2-232ENST00000557487 TMPRSS5Q9H3S3 457 aa14.21□□□□□ -0.13
SHMT2-232ENST00000557487 MYOTQ9UBF9 498 aa14.21□□□□□ -0.13
SHMT2-232ENST00000557487 PCDH15Q96QU1 1955 aa14.21□□□□□ -0.13
SHMT2-232ENST00000557487 A0A1W2PNR3 127 aa14.21□□□□□ -0.14
SHMT2-232ENST00000557487 EIF1BO60739 113 aaKnown RBP14.21□□□□□ -0.14
SHMT2-232ENST00000557487 PRH1P02810 166 aa14.21□□□□□ -0.14
SHMT2-232ENST00000557487 GABRR1P24046 479 aa14.21□□□□□ -0.14
SHMT2-232ENST00000557487 CLDN17P56750 224 aa14.21□□□□□ -0.14
SHMT2-232ENST00000557487 ENDOGQ14249 297 aaKnown RBP14.21□□□□□ -0.14
SHMT2-232ENST00000557487 KRBOX4Q5JUW0 171 aa14.21□□□□□ -0.14
SHMT2-232ENST00000557487 LCN10Q6JVE6 187 aa14.21□□□□□ -0.14
SHMT2-232ENST00000557487 ASCL4Q6XD76 172 aa14.21□□□□□ -0.14
SHMT2-232ENST00000557487 ETV3LQ6ZN32 361 aa14.21□□□□□ -0.14
SHMT2-232ENST00000557487 SHISA6Q6ZSJ9 500 aa14.21□□□□□ -0.14
SHMT2-232ENST00000557487 NPRL2Q8WTW4 380 aa14.21□□□□□ -0.14
SHMT2-232ENST00000557487 ABHD14BQ96IU4 210 aa14.21□□□□□ -0.14
SHMT2-232ENST00000557487 NIT2Q9NQR4 276 aa14.21□□□□□ -0.14
SHMT2-232ENST00000557487 NSG1A0A0A6YYJ2 146 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 A0A1W2PPH5 198 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 A6NLC8 198 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 ZNF850A8MQ14 1090 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 ZNF814B7Z6K7 855 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 E9PLN8 166 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 F5H5K5 113 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 M0R135 149 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 MASP2O00187 686 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 OR5AC1P0C628 307 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 ANOS1P23352 680 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 ZNF266Q14584 549 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 GNMTQ14749 295 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 OR8B8Q15620 311 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 NKAIN1Q4KMZ8 207 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms