RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 PGAM4Q8N0Y7 254 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 ASCC1Q8N9N2 400 aaKnown RBP7.16□□□□□ -1.26
NEDD1-211ENST00000557454 ZNF596Q8TC21 504 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 TAMM41Q96BW9 452 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 COPS4Q9BT78 406 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 OR14J1Q9UGF5 321 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 IGHV4OR15-8A0A075B7B6 117 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 A0A087WW49 117 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 SDHDO14521 159 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 RRP9O43818 475 aaKnown RBP7.15□□□□□ -1.26
NEDD1-211ENST00000557454 TFAP2AP05549 437 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 CRABP1P29762 137 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 CEACAM3P40198 252 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 RPS27P42677 84 aaKnown RBP7.15□□□□□ -1.26
NEDD1-211ENST00000557454 CDKN2AP42771 156 aaKnown RBP7.15□□□□□ -1.26
NEDD1-211ENST00000557454 POLR2JP52435 117 aaKnown RBP7.15□□□□□ -1.26
NEDD1-211ENST00000557454 RBM39Q14498 530 aaKnown RBP7.15□□□□□ -1.26
NEDD1-211ENST00000557454 GFOD2Q3B7J2 385 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 PRAMEF5Q5TYX0 476 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 DNM1P34Q6PK57 102 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 ADCK1Q86TW2 530 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 NRMQ8IXM6 262 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 BATF2Q8N1L9 274 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 TPRX1Q8N7U7 411 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 FAM156AQ8NDB6 213 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 CSNK2A3Q8NEV1 391 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 TRMT10AQ8TBZ6 339 aaKnown RBP7.15□□□□□ -1.26
NEDD1-211ENST00000557454 PHLDA1Q8WV24 401 aaPredicted RBP7.15□□□□□ -1.26
NEDD1-211ENST00000557454 TMEM106AQ96A25 262 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 ZBTB9Q96C00 473 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 RNF183Q96D59 192 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 RHOVQ96L33 236 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 KCTD7Q96MP8 289 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 OVOL2Q9BRP0 275 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 C20orf27Q9GZN8 174 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 ABCG5Q9H222 651 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 OR51I2Q9H344 312 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 B9D1Q9UPM9 204 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 MPC1Q9Y5U8 109 aa7.15□□□□□ -1.26
NEDD1-211ENST00000557454 LY6LH3BQJ8 138 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 BUB1B-PAK6H3BSN5 160 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 K7N7A8 449 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 CDC42EP2O14613 210 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 BPGMP07738 259 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 TROVE2P10155 538 aaKnown RBP eCLIP7.14□□□□□ -1.27
NEDD1-211ENST00000557454 NOS3P29474 1203 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 GPR4P46093 362 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 RPL14P50914 215 aaKnown RBP7.14□□□□□ -1.27
NEDD1-211ENST00000557454 EIF2B1Q14232 305 aaKnown RBP7.14□□□□□ -1.27
NEDD1-211ENST00000557454 EDDM3AQ14507 147 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 HLA-DRB5Q30154 266 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 ANKDD1AQ495B1 522 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 SLC36A3Q495N2 470 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 LRIF1Q5T3J3 769 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 GDPD3Q7L5L3 318 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 ZDHHC21Q8IVQ6 265 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 C11orf65Q8NCR3 313 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 TSEN15Q8WW01 171 aaKnown RBP7.14□□□□□ -1.27
NEDD1-211ENST00000557454 AQP3Q92482 292 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 SGK3Q96BR1 496 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 WDR89Q96FK6 387 aaPredicted RBP7.14□□□□□ -1.27
NEDD1-211ENST00000557454 SORT1Q99523 831 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 NRIP2Q9BQI9 281 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 NSRP1Q9H0G5 558 aaKnown RBP7.14□□□□□ -1.27
NEDD1-211ENST00000557454 ZNF286AQ9HBT8 521 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 ING3Q9NXR8 418 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 RASL12Q9NYN1 266 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 VAPAQ9P0L0 249 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 SH3GLB1Q9Y371 365 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 RAP2CQ9Y3L5 183 aa7.14□□□□□ -1.27
NEDD1-211ENST00000557454 hADV38S2A0JD32 116 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 OOSP1A8MZH6 123 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 SPAG7O75391 227 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 IGKV1D-33P01593 117 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 IGKV1-33P01594 117 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 HLA-DQA2P01906 255 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 SHBGP04278 402 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 ANXA2P07355 339 aaKnown RBP7.13□□□□□ -1.27
NEDD1-211ENST00000557454 PSKH1P11801 424 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 IDO1P14902 403 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 GPX2P18283 190 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 RHCEP18577 417 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 PPIBP23284 216 aaKnown RBP7.13□□□□□ -1.27
NEDD1-211ENST00000557454 ACKR3P25106 362 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 ZP1P60852 638 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 ABCE1P61221 599 aaKnown RBP7.13□□□□□ -1.27
NEDD1-211ENST00000557454 MEF2CQ06413 473 aaPredicted RBP7.13□□□□□ -1.27
NEDD1-211ENST00000557454 HAGHLQ6PII5 290 aaPredicted RBP7.13□□□□□ -1.27
NEDD1-211ENST00000557454 LYG2Q86SG7 212 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 RTN4RL2Q86UN3 420 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 FTMTQ8N4E7 242 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 POC1AQ8NBT0 407 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 OR4C15Q8NGM1 316 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 ZNF671Q8TAW3 534 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 SLC26A7Q8TE54 656 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 PIGCQ92535 297 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 TOMM40LQ969M1 308 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 RPEQ96AT9 228 aa7.13□□□□□ -1.27
NEDD1-211ENST00000557454 EAF1Q96JC9 268 aaPredicted RBP7.13□□□□□ -1.27
NEDD1-211ENST00000557454 PKNOX2Q96KN3 472 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms