RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CLDN12P56749 244 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 ZP1P60852 638 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 MRPS11P82912 194 aaKnown RBP9.49□□□□□ -0.89
SHMT2-220ENST00000555634 MRPS15P82914 257 aaKnown RBP9.49□□□□□ -0.89
SHMT2-220ENST00000555634 ARL6IP1Q15041 203 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 FAM76BQ5HYJ3 339 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 SPIN3Q5JUX0 258 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 ZNF787Q6DD87 383 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 C11orf71Q6IPW1 123 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 CDH24Q86UP0 819 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 FAM90A1Q86YD7 464 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 CALHM1Q8IU99 346 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 OSR2Q8N2R0 312 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 POC1AQ8NBT0 407 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 OR51D1Q8NGF3 324 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 Q8TCH9 128 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 C15orf40Q8WUR7 153 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 FAM46BQ96A09 425 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 S100A16Q96FQ6 103 aaKnown RBP9.49□□□□□ -0.89
SHMT2-220ENST00000555634 SLIRPQ9GZT3 109 aaKnown RBP9.49□□□□□ -0.89
SHMT2-220ENST00000555634 SPACA1Q9HBV2 294 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 DIABLOQ9NR28 239 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 RHBDL2Q9NX52 303 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 RNF7Q9UBF6 113 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 RAB22AQ9UL26 194 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 HRNRQ86YZ3 2850 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-220ENST00000555634 ABCA4P78363 2273 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 IGKV1-27A0A075B6S5 117 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 A0A0A6YYH2 397 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 IGHV3-64DA0A0J9YX35 117 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 A6NJ64 397 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 CDC14BO60729 498 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 PTBP3O95758 552 aaKnown RBP9.48□□□□□ -0.89
SHMT2-220ENST00000555634 APOA1P02647 267 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 PGA5P0DJD9 388 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 SNRPBP14678 240 aaKnown RBP9.48□□□□□ -0.89
SHMT2-220ENST00000555634 MGMTP16455 207 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 PRKACAP17612 351 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 FGF12P61328 243 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 MAB21L1Q13394 359 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 MICBQ29980 383 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 ZNF181Q2M3W8 571 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 MPV17LQ2QL34 196 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 MST1LQ2TV78 715 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 WDR82Q6UXN9 313 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 LINC00299Q6ZSB3 139 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 NR2C2APQ86WQ0 139 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 FAM58AQ8N1B3 248 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 BOLLQ8N9W6 283 aaKnown RBP9.48□□□□□ -0.89
SHMT2-220ENST00000555634 OR56B1Q8NGI3 324 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 CCL17Q92583 94 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 RDH5Q92781 318 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 POM121Q96HA1 1249 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 GFI1Q99684 422 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 BARHL1Q9BZE3 327 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 SELENOIQ9C0D9 397 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 ATG5Q9H1Y0 275 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 PPP1R3EQ9H7J1 279 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 PLEKHF2Q9H8W4 249 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 GCM1Q9NP62 436 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 FBLN5Q9UBX5 448 aa9.48□□□□□ -0.89
SHMT2-220ENST00000555634 USP9YO00507 2555 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-220ENST00000555634 TRAV38-1A0A0B4J264 116 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 TMEM272A0A1B0GTI8 110 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 SYNGR1O43759 233 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 ACAA1P09110 424 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-220ENST00000555634 VSIG8P0DPA2 414 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 DAOP14920 347 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 BCL3P20749 454 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 DNASE1P24855 282 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 CDKN1AP38936 164 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 EFNA4P52798 201 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 RBM11P57052 281 aaKnown RBP9.47□□□□□ -0.89
SHMT2-220ENST00000555634 PITPNAQ00169 270 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 IKZF1Q13422 519 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 IL13RA2Q14627 380 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 MPPED2Q15777 294 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 CARTPTQ16568 116 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 C2orf76Q3KRA6 126 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 TMEM69Q5SWH9 247 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 ELP2Q6IA86 826 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 FAM166AQ6J272 317 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 WDR86Q86TI4 376 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 MUC20Q8N307 709 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-220ENST00000555634 OR51T1Q8NGJ9 327 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 OR10K1Q8NGX5 313 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 S100ZQ8WXG8 99 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 TSC22D3Q99576 134 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 NRIP2Q9BQI9 281 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 HMG20AQ9NP66 347 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 TMEM106BQ9NUM4 274 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 OR5V1Q9UGF6 321 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 TEP1Q99973 2627 aaKnown RBP9.47□□□□□ -0.89
SHMT2-220ENST00000555634 ROS1P08922 2347 aa9.47□□□□□ -0.89
SHMT2-220ENST00000555634 UTP20O75691 2785 aaKnown RBP9.46□□□□□ -0.89
SHMT2-220ENST00000555634 FAM90A10PA6NDY2 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 FAM90A18PA6NE21 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 FAM90A16PA6NEW6 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 FAM90A20PA6NIJ5 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 FAM90A8PA6NJQ4 464 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms