RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 OR51B2Q9Y5P1 312 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 UBR3Q6ZT12 1888 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 PAPPAQ13219 1627 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 MED23Q9ULK4 1368 aa3.11□□□□□ -1.91
CKS1BP1-201ENST00000555221 SHANK3Q9BYB0 1731 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 TAF1LQ8IZX4 1826 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 IGHV3-49A0A0A0MS15 119 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 A0A0B4J2E0 115 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 A0A1W2PPV4 95 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 UPK1BO75841 260 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 MBP02144 154 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 THRAP10827 490 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 ARL2P36404 184 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 CFHR2P36980 270 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 CSKP41240 450 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 ERFP50548 548 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 RPL18AQ02543 176 aaKnown RBP3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 STK38Q15208 465 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 SLC25A35Q3KQZ1 300 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 MFSD14CQ5VZR4 134 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 WDR31Q8NA23 367 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 FBXO36Q8NEA4 188 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR10Z1Q8NGY1 313 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 RTN4IP1Q8WWV3 396 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 RDH12Q96NR8 316 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 CDX2Q99626 313 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 SFXN3Q9BWM7 321 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 C21orf62Q9NYP8 219 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 CBY1Q9Y3M2 126 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 ABCC12Q96J65 1359 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 C4AP0C0L4 1744 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 UBR2Q8IWV8 1755 aa3.1□□□□□ -1.91
CKS1BP1-201ENST00000555221 TRANK1O15050 2925 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 A0A0A6YYD5 115 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 ARPC4-TTLL3A0A0A6YYG9 625 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 A0A0J9YYE9 177 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 MANBAO00462 879 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 MYL12BO14950 172 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 TTC4O95801 387 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 TRBV12-3P01733 135 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 TRBC1P01850 177 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 CRYGCP07315 174 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 HOXB8P17481 243 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 PRLHRP49683 370 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 UNQ9165/PRO28630Q6UXU0 137 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 Q6ZSR6 202 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 DAW1Q8N136 415 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 RNF182Q8N6D2 247 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 ZNF645Q8N7E2 425 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR5T1Q8NG75 326 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR52K1Q8NGK4 314 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR6K6Q8NGW6 343 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR1S1Q8NH92 325 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR1L1Q8NH94 360 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 TCP10LQ8TDR4 215 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 OR4K3Q96R72 315 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 FBXO44Q9H4M3 255 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 FBXO8Q9NRD0 319 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 S4R3C0 116 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 COL5A3P25940 1745 aaPredicted RBP3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 TOGARAM1Q9Y4F4 1720 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 CASZ1Q86V15 1759 aa3.09□□□□□ -1.91
CKS1BP1-201ENST00000555221 SIPA1L3O60292 1781 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 KDM3BQ7LBC6 1761 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 LOC100653049A0A140TA62 436 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 A0A1W2PQ67 120 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 LINC01619G3V211 115 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 PSPHP1O15172 72 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 KRT34O76011 436 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 ETHE1O95571 254 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 CYB5R3P00387 301 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 GCGP01275 180 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 CPN2P22792 545 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 UBE2E1P51965 193 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 PSMC5P62195 406 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 LY6EQ16553 131 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 DEFB115Q30KQ5 88 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 STEAP4Q687X5 459 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 OSR2Q8N2R0 312 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 ZNF561Q8N587 486 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 LINC00469Q8N7U9 141 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 OR51L1Q8NGJ5 315 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 OR8D1Q8WZ84 308 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 TOP1MTQ969P6 601 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 FAM19A4Q96LR4 140 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 UBE2E2Q96LR5 201 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 OSBPL11Q9BXB4 747 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 ZNF717Q9BY31 904 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 KIR3DX1Q9H7L2 352 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 LZTFL1Q9NQ48 299 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 RBFOX1Q9NWB1 397 aaKnown RBP3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 ZMAT5Q9UDW3 170 aaKnown RBP3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 SIGLEC9Q9Y336 463 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 KPTNQ9Y664 436 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 DLG5Q8TDM6 1919 aa3.08□□□□□ -1.92
CKS1BP1-201ENST00000555221 TJP1Q07157 1748 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 DOCK8Q8NF50 2099 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 VCANP13611 3396 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 PIEZO1Q92508 2521 aa3.07□□□□□ -1.92
CKS1BP1-201ENST00000555221 IGHV1-3A0A0C4DH29 117 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms