RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CYSLTR2Q9NS75 346 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 ETV7Q9Y603 341 aa9.11□□□□□ -0.95
TDP1-211ENST00000555178 A0A0G2JMP0 313 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 A0A0X1KG70 313 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 HTR3BO95264 441 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 APOA1P02647 267 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 CDK2P24941 298 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 ART1P52961 327 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 SELENOVP59797 346 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 EFNB3Q15768 340 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 PIGYQ3MUY2 71 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 FAM76BQ5HYJ3 339 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 FAM131AQ6UXB0 335 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 OR4M2Q8NGB6 313 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 AQP3Q92482 292 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 SDHCQ99643 169 aaPredicted RBP9.1□□□□□ -0.95
TDP1-211ENST00000555178 CXXC4Q9H2H0 198 aa9.1□□□□□ -0.95
TDP1-211ENST00000555178 ELF5Q9UKW6 265 aaPredicted RBP9.1□□□□□ -0.95
TDP1-211ENST00000555178 FABP12A6NFH5 140 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 A6NLC8 198 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 C17orf100A8MU93 164 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 CLDN25C9JDP6 229 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 AKR7A2O43488 359 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 HPXP02790 462 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 TFF1P04155 84 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 MGMTP16455 207 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 DYNC1I2Q13409 638 aaKnown RBP9.09□□□□□ -0.95
TDP1-211ENST00000555178 RSU1Q15404 277 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 RNASE12Q5GAN4 147 aaKnown RBP9.09□□□□□ -0.95
TDP1-211ENST00000555178 SPANXN2Q5MJ10 180 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 FBXL14Q8N1E6 418 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 C19orf18Q8NEA5 215 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 IGFBPL1Q8WX77 278 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 MARVELD3Q96A59 401 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 S100A13Q99584 98 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 TRAF4Q9BUZ4 470 aaPredicted RBP9.09□□□□□ -0.95
TDP1-211ENST00000555178 SELENOIQ9C0D9 397 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 LPAR5Q9H1C0 372 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 ATG5Q9H1Y0 275 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 ABCG5Q9H222 651 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 ZMAT3Q9HA38 289 aaKnown RBP9.09□□□□□ -0.95
TDP1-211ENST00000555178 MRPS7Q9Y2R9 242 aaKnown RBP9.09□□□□□ -0.95
TDP1-211ENST00000555178 LRP5LA4QPB2 252 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 B9A039 149 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 J3QT63 122 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 M0R233 179 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 WNT9BO14905 357 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 ETV6P41212 452 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 VEGFCP49767 419 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 IL18Q14116 193 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 FAM201AQ5SY85 155 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 ASCL4Q6XD76 172 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 DTX2Q86UW9 622 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 ZNF573Q86YE8 665 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 MEGF10Q96KG7 1140 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 ABHD1Q96SE0 405 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 VRK1Q99986 396 aaPredicted RBP9.09□□□□□ -0.95
TDP1-211ENST00000555178 SOSTQ9BQB4 213 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 TMEM59Q9BXS4 323 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 CACNG6Q9BXT2 260 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 METTL9Q9H1A3 318 aa9.09□□□□□ -0.95
TDP1-211ENST00000555178 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.08□□□□□ -0.96
TDP1-211ENST00000555178 SOCS1O15524 211 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 ZNF205O95201 554 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 MPZP25189 248 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 DUSP1P28562 367 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 WDR82Q6UXN9 313 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 MOGAT3Q86VF5 341 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 PXT1Q8NFP0 134 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 CPNE2Q96FN4 548 aaPredicted RBP9.08□□□□□ -0.96
TDP1-211ENST00000555178 MRI1Q9BV20 369 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 SLC22A4Q9H015 551 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 WDR13Q9H1Z4 485 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 HMG20AQ9NP66 347 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 CBLN4Q9NTU7 201 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 C14orf119Q9NWQ9 140 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 hCG_1807616A0A1W2PRN6 198 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 RAB27BO00194 218 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 EGR1P18146 543 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 GABRR1P24046 479 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 CD200P41217 278 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 PTH2RP49190 550 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 SCAND1P57086 179 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 RPS27AP62979 156 aaKnown RBP9.08□□□□□ -0.96
TDP1-211ENST00000555178 TNFAIP6P98066 277 aaPredicted RBP9.08□□□□□ -0.96
TDP1-211ENST00000555178 IL24Q13007 206 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 TAF9Q16594 264 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 TMEM69Q5SWH9 247 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 OLFML2AQ68BL7 652 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 LINC00299Q6ZSB3 139 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 OR2W3Q7Z3T1 314 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 KCNG3Q8TAE7 436 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 SRRQ9GZT4 340 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 CST11Q9H112 138 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 CXorf56Q9H5V9 222 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 DYNLRB1Q9NP97 96 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 C1orf123Q9NWV4 160 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 NKIRAS2Q9NYR9 191 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 ADAM30Q9UKF2 790 aa9.08□□□□□ -0.96
TDP1-211ENST00000555178 RAB22AQ9UL26 194 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms