RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 DUX4L7P0CJ90 424 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 CXCL3P19876 107 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 ENPP1P22413 925 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 AGTR1P30556 359 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 RAD52P43351 418 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 ZP1P60852 638 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 UBE2MP61081 183 aaKnown RBP9.6□□□□□ -0.87
SHMT2-216ENST00000554975 RAB14P61106 215 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 FGL1Q08830 312 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 PPA1Q15181 289 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 RAB35Q15286 201 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 STK11Q15831 433 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 TMEM255AQ5JRV8 349 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 CARD17Q5XLA6 110 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 LIN54Q6MZP7 749 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 C11orf88Q6PI97 169 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 UTS2BQ765I0 119 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 NLRC3Q7RTR2 1065 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF101Q8IZC7 436 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 SLC7A5P1Q8MH63 180 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 TMEM123Q8N131 208 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 GPR137CQ8N3F9 429 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 FTMTQ8N4E7 242 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 UXS1Q8NBZ7 420 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 STEAP2Q8NFT2 490 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 BEST4Q8NFU0 473 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 OR2AK2Q8NG84 335 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 OR8H1Q8NGG4 311 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 OR52H1Q8NGJ2 320 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 OR51S1Q8NGJ8 323 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 FNDC9Q8TBE3 224 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 ADAT3Q96EY9 351 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-216ENST00000554975 SCGB3A2Q96PL1 93 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 UCN2Q96RP3 112 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 SEC22CQ9BRL7 303 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 TMEM59Q9BXS4 323 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 CNTD2Q9H8S5 307 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 GPR84Q9NQS5 396 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 EIF3KQ9UBQ5 218 aaKnown RBP9.6□□□□□ -0.87
SHMT2-216ENST00000554975 DUX4Q9UBX2 424 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 UBQLN2Q9UHD9 624 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 ATPIF1Q9UII2 106 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 MAB21L2Q9Y586 359 aa9.6□□□□□ -0.87
SHMT2-216ENST00000554975 A0A1B0GTI1 187 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 ANKRD34BA5PLL1 514 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 HMSDA8MTL9 139 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 SMLR1H3BR10 107 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 L7N2F9 121 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 TNFSF11O14788 317 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 CXCL13O43927 109 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 NOS1APO75052 506 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-216ENST00000554975 CA11O75493 328 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 DHRS3O75911 302 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 HPXP02790 462 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 CD3DP04234 171 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 FCGR2AP12318 317 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 ANXA7P20073 488 aaKnown RBP9.59□□□□□ -0.87
SHMT2-216ENST00000554975 OTX1P32242 354 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-216ENST00000554975 ALDH3B1P43353 468 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 PRKXP51817 358 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 PCBD1P61457 104 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 HIST1H3AP68431 136 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 GUCA2AQ02747 115 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF260Q3ZCT1 412 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 NRN1LQ496H8 165 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 C4orf46Q504U0 113 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 CLVS2Q5SYC1 327 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 HIST2H3PS2Q5TEC6 136 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 ABLIM2Q6H8Q1 611 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 DRAM2Q6UX65 266 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 IDO2Q6ZQW0 420 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 Q6ZSR3 168 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 HIST2H3AQ71DI3 136 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 SLC36A1Q7Z2H8 476 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 GGNQ86UU5 652 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 BPIFB2Q8N4F0 458 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 ARRDC1Q8N5I2 433 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 OR4D6Q8NGJ1 314 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 OR10R2Q8NGX6 335 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 OR10D3Q8NH80 312 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 OR51E1Q8TCB6 317 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 CPNE4Q96A23 557 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-216ENST00000554975 TECTBQ96PL2 329 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 GPER1Q99527 375 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 OR10A2Q9H208 303 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 TMEM165Q9HC07 324 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 PNRC2Q9NPJ4 139 aaKnown RBP9.59□□□□□ -0.87
SHMT2-216ENST00000554975 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.59□□□□□ -0.87
SHMT2-216ENST00000554975 MCTS1Q9ULC4 181 aaKnown RBP9.59□□□□□ -0.87
SHMT2-216ENST00000554975 FLVCR2Q9UPI3 526 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 LAMP3Q9UQV4 416 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 RHBDD3Q9Y3P4 386 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF175Q9Y473 711 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 PLCE1Q9P212 2302 aa9.59□□□□□ -0.87
SHMT2-216ENST00000554975 HEATR1Q9H583 2144 aaKnown RBP9.58□□□□□ -0.88
SHMT2-216ENST00000554975 A0A0J9YW62 118 aa9.58□□□□□ -0.88
SHMT2-216ENST00000554975 TMEM235A6NFC5 223 aa9.58□□□□□ -0.88
SHMT2-216ENST00000554975 OR6C65A6NJZ3 312 aa9.58□□□□□ -0.88
SHMT2-216ENST00000554975 M0R135 149 aa9.58□□□□□ -0.88
SHMT2-216ENST00000554975 OVOL3O00110 214 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms